Understanding the relationship between molecular structure and function represents an important goal of undergraduate life sciences. Although evidence suggests that handling physical models supports gains in student understanding of structure–function relationships, such models have not been widely implemented in biochemistry classrooms. Three‐dimensional (3D) printing represents an emerging cost‐effective means of producing molecular models to help students investigate structure–function concepts. We developed three interactive learning modules with dynamic 3D printed models to help biochemistry students visualize biomolecular structures and address particular misconceptions. These modules targeted specific learning objectives related to DNA and RNA structure, transcription factor‐DNA interactions, and DNA supercoiling dynamics. We also designed accompanying assessments to gauge student learning. Students responded favorably to the modules and showed normalized learning gains of 49% with respect to their ability to understand and relate molecular structures to biochemical functions. By incorporating accurate 3D printed structures, these modules represent a novel advance in instructional design for biomolecular visualization. We provide instructors with the materials necessary to incorporate each module in the classroom, including instructions for acquiring and distributing the models, activities, and assessments. © 2019 International Union of Biochemistry and Molecular Biology, 47(3):303–317, 2019.
DETECHIP ® is a novel, highly selective and sensitive molecular sensor array producing color and fluorescence changes in the presence of many small molecules or analytes. This technology utilizes an array of eight sensors in two types of buffers that are dispensed in a 96-well plate. Color and fluorescent changes in the presence of analytes are recorded as a 32 digit binary code that is able to discriminate many substances. The current application is dedicated to testing narcotics such as cocaine, tetrahydrocannabinol (THC) from marijuana, as well as daterape and club drugs such as flunitrazepam, gamma-hydroxybutyric acid (GHB), and methamphetamine, to name a few. Shown to be a contactless, portable, and inexpensive optical detection system, DETECHIP ® can detect many substances and therefore can be used where a high degree of preliminary diagnostics is needed.Besides narcotics, DETECHIP ® is able to detect and discriminate over-the-counter medications, trinitrotoluene (TNT), pesticides, food spoilage metabolites, and narcotics laced with cutting agents. DETECHIP ® offers possibilities for a simple, sensitive, selective, and affordable alternative to costly immunoassays.
Photoactive perovskite quantum dot films, deposited via an inkjet printer, have been characterized by x-ray diffraction and x-ray photoelectron spectroscopy. The crystal structure and bonding environment are consistent with CsPbBr perovskite quantum dots. The current-voltage (I-V) and capacitance-voltage (C-V) transport measurements indicate that the photo-carrier drift lifetime can exceed 1 ms for some printed perovskite films. This far exceeds the dark drift carrier lifetime, which is below 50 ns. The printed films show a photocarrier density 10 greater than the dark carrier density, making these printed films ideal candidates for application in photodetectors. The successful printing of photoactive-perovskite quantum dot films of CsPbBr, indicates that the rapid prototyping of various perovskite inks and multilayers is realizable.
DETECHIP® is a molecular sensing array used for identification of a large variety of substances. Previous methodology for the analysis of DETECHIP® used human vision to distinguish color changes induced by the presence of the analyte of interest. This paper describes several analysis techniques using digital images of DETECHIP®. Both a digital camera and flatbed desktop photo scanner were used to obtain Jpeg images. Color information within these digital images was obtained through the measurement of red-green-blue (RGB) values using software such as GIMP, Photoshop and ImageJ. Several different techniques were used to evaluate these color changes. It was determined that the flatbed scanner produced in the clearest and more reproducible images. Furthermore, codes obtained using a macro written for use within ImageJ showed improved consistency versus pervious methods.
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