The objective of this study was to characterize the declining Somba cattle population in its production system context. Two-hundred-twenty-four (224) cattle farm-households were surveyed in the Boukombe district, the natural habitat of the breed in North-West Benin. Information on their socioeconomic characteristics and on their herd management practices were recorded using a semi-structured questionnaire. In addition, 15 body measurements were recorded from 102 adult cattle. Three types of breeders were distinguished: the owners-herders (54.0 %); the absentee owners (40.2 %) and the professional herders (5.8 %). The average cattle herd sizes were 4.7 ± 3.70 and 58.6 ± 22.83 heads for owner-managed and entrusted herds, respectively. Offtakes were more associated with sociocultural purposes (75.5 %) than market. While crop farming was the main occupation and income source of their owners, the Somba cattle were used for ploughing during the rainy season. In contrast to the widely accepted belief that this indigenous genetic resource is mainly threatened by crossbreeding and/or replacement, our findings suggest high mortalities due to diseases, feed and water shortages and poor reproduction management as the main causes of the decline of this cattle population. Somba cattle generally have short horns and a small body size. However, bulls have significantly (P ≤ 0.05) longer horns (21.2 ± 16.44 cm against 13.9 ± 7.21 cm), higher height at withers (99.7 ± 6.97 cm against 95.9 ± 5.76 cm) and body length (149.7 ± 12.87 cm against 146.8 ± 11.01 cm) than cows. All surveyed farmers expressed their willingness and readiness to participate in and contribute materially or financially to any program towards a sustainable use and preservation of this breed which they perceived as hardy and embedded in their culture. We therefore argue that strategies for its sustainable use and conservation should consist of simultaneously improving general herd management practices, organizing farmers and involving them in participatory breed improvement programs.

Background Specific adaptive features including disease resistance and growth abilities in harsh environments are attributed to indigenous cattle breeds of Benin, but these breeds are endangered due to crossbreeding. So far, there is a lack of systematic trait recording, being the basis for breed characterizations, and for structured breeding program designs aiming on conservation. Bridging this gap, own phenotyping for morphological traits considered measurements for height at withers (HAW), sacrum height (SH), heart girth (HG), hip width (HW), body length (BL) and ear length (EL), including 449 cattle from the four indigenous Benin breeds Lagune, Somba, Borgou and Pabli. In order to utilize recent genomic tools for breed characterizations and genetic evaluations, phenotypes for novel traits were merged with high-density SNP marker data. Multi-breed genetic parameter estimations and genome-wide association studies (GWAS) for the six morphometric traits were carried out. Continuatively, we aimed on inferring genomic regions and functional loci potentially associated with conformation, carcass and adaptive traits. Results SNP-based heritability estimates for the morphometric traits ranged between 0.46 ± 0.14 (HG) and 0.74 ± 0.13 (HW). Phenotypic and genetic correlations ranged from 0.25 ± 0.05 (HW-BL) to 0.89 ± 0.01 (HAW-SH), and from 0.14 ± 0.10 (HW-BL) to 0.85 ± 0.02 (HAW-SH), respectively. Three genome-wide and 25 chromosome-wide significant SNP positioned on different chromosomes were detected, located in very close chromosomal distance (±25 kb) to 15 genes (or located within the genes). The genes PIK3R6 and PIK3R1 showed direct functional associations with height and body size. We inferred the potential candidate genes VEPH1, CNTNAP5, GYPC for conformation, growth and carcass traits including body weight and body fat deposition. According to their functional annotations, detected potential candidate genes were associated with stress or immune response (genes PTAFR, PBRM1, ADAMTS12) and with feed efficiency (genes MEGF11 SLC16A4, CCDC117). Conclusions Accurate measurements contributed to large SNP heritabilities for some morphological traits, even for a small mixed-breed sample size. Multi-breed GWAS detected different loci associated with conformation or carcass traits. The identified potential candidate genes for immune response or feed efficiency indicators reflect the evolutionary development and adaptability features of the breeds.

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West African (agro)-pastoralists have been increasingly using extra-household labour for the management of their cattle herds. This paper seeks to identify the factors influencing cattle owners’ decision to entrust their animals and to analyse the effects of the entrustment practice on the management and sustainable use of the animal genetic diversity within herds. Two hundred and eleven cattle farmers, including absentee-owners (n = 90) who entrusted their animals to professional herders, and owner-managers (n = 121) who look themselves after their cattle, were randomly selected and surveyed in Boukombe district in northwest Benin, the origin of the West African shorthorn Somba cattle breed. Households' socio-economic data and information on herds’ characteristics and management practices were collected using semi-structured questionnaires. The binary logistic regression technique was used to predict the adoption of entrustment by a given farmer in function of his herd’s and household's socio-economic characteristics. Effective population sizes and inbreeding rates for the communal non-entrusted and entrusted Somba populations were estimated and compared. The results revealed that the mode of acquisition of the initial stock, the total livestock units owned and the farmer’s ethnicity were the most important determinants of entrustment. The Somba indigenous cattle breed was threatened in entrusted herds by indiscriminate cross-breeding with Zebus. However, the non-entrusted population appeared to be more exposed to high inbreeding risks. While entrustment represents a good alternative for the efficient use of family labour, adequate strategies are needed to support this practice and encourage herd managers to adopt improved husbandry practices and sound breeding strategies.

For centuries, the humid West African coastal country of Benin attracts cattle herders from neighboring Sahelian countries such as Niger, Burkina Faso and Nigeria. Each year, several thousands of cattle are trekked over hundreds of kilometers to Benin following established and non-established transhumance corridors. This cross-border mobility has been shown to play an important role in ensuring the productivity of the transhumant herds through adequate late dry season access to pastoral resources. Yet, its effects on the traditional agro-pastoral production systems that are encountered along the routes in Benin have never been explicitly investigated. Therefore, we collected socio-economic household data, herd characteristics and management data from 104 resident herders and 38 transhumant herders in 2 vegetation zones of Benin. To determine whether or not the proximity to transhumance corridors affects sedentary production systems, characteristics of cattle herds and farmers’ management practices were compared between villages close to (within a 25 km buffer) and far from (outside a 25 km buffer) transhumance corridors within and between vegetation zones using non-parametric statistical tests. Existing relationships between resident and transhumant herders were also identified and characterized. Subsequently, herd characteristics and management practices were compared between resident herders having relationships with transhumant herders and those without. Herd sizes of resident herders living close to transhumance corridors were larger (P < 0.01) than those of their counterparts living far away. Also, proximity to transhumance corridors had positive effects on herd management practices. The relationships between resident and transhumant herders were governed by a variety of interests including encampment/manuring contracts, exploitation of grazing lands and watering points, trading and bartering of cattle. This exchange of cattle is an important driver of change in the breed composition of local herds and represents an opportunity for resident herders to enhance their herds’ productivity through crossbreeding. However, the mere replacement or indiscriminate crossbreeding of local cattle breeds with those kept by transhumant herders threatens the sustainability of the traditional resident herding systems by increasing the risk of genetic erosion and loss of valuable adaptive traits in indigenous animal genetic resources.

Persistent food insecurity, along with climate change pressures, urges on the definition of suitable strategies to support the transformation of low-input livestock farming in developing countries. Advances in genomics and information technologies are valuable opportunities for achieving the required improvement, but their implementation implies access to technical and financial resources with appropriate adjustment in the local context. Addressing extensive cattle production in Benin, we focus on animal genetic resources (AnGR) and corresponding approaches aiming for a durable breeding improvement based on sustainable management strategies. Specifically, smallholder breeding goals are revised, and novel strategies for proper organization, sound data collection, and scientific investigations are explored. Further emphasis addresses the enhancement of farmer management practices, including valuable traditional knowledge; and breeding strategies to improve animal performances considering robustness and further traits favored by the farmers. Against such a background, it is imperative that political, institutional, and scientific collaborations reinforce research capacities and technical and financial resources. In the given context, the current review article provides policymakers and national and international researchers with practical guidance based on scientific criteria for a smallholder livestock amelioration in Benin, scalable to other countries in sub-Saharan Africa.

The sustainable use of rangelands in pastoral areas requires the inclusion of all stakeholders to develop sound management strategies. However, the role of these actors in the sustainable management of natural resources is still poorly understood. The present study aims to (i) assess the perception of farmers and herders of the risks and opportunities of transhumance on rangeland resource use and management, and to (ii) generate useful knowledge for the design and implementation of policies that favor the coexistence of these actors and reduce competition over rangeland resources use in Benin. To this end, interviews were conducted with 240 crop farmers and herders using a semi-structured questionnaire in two contrasting agroecological zones in the northern (Kandi) and the southern (Kétou) part of the country. Among the respondents, 64% of farmers in the North were agro-pastoralists (owning 10.6 ha of land and 10.7 cattle) and 36% were herders (keeping 45.8 cattle and cultivating about 3.7 ha of land). They perceived that communal rangelands were entirely degraded. In the South, 36% of respondents were agro-pastoralists (with 0.3 cattle and farming 4 ha of land) and 64% cattle herders (raising 45.3 cattle and farming 0.9 ha of land only). Of the herders, 50% kept cattle for more than 20 years, while agro-pastoralists had no previous experience in cattle herding. Cultivation practices among crop farmers, such as high use of mineral fertilization (23.8%) and bush fires for land clearing (22.5%), were reported in Kandi (North) and Kétou (South) as factors that might contribute to land degradation. However, these farmers perceived transhumance as a threat to the sustainable use of natural resources. In contrast, herders perceived transhumance as an opportunity to valorize unused land and increase the availability of manure to cropland. The prevalent negative attitude of crop farmers regarding transhumant herders increases the vulnerability of cattle herding in both regions. There is an urgent need of raising awareness concerning the mutual benefits provided by the coexistence of crop farmers with herders to promote participative rangeland management strategies. This may contribute towards coping with the current challenges of food insecurity and increasing climate variability as well as to reducing recurrent conflicts in the region.