The absorption spectra of two photoactive yellow protein model chromophores have been measured in vacuum using an electrostatic ion storage ring. The absorption spectrum of the isolated chromophore is an important reference for deducing the influence of the protein environment on the electronic energy levels of the chromophore and separating the intrinsic properties of the chromophore from properties induced by the protein environment. In vacuum the deprotonated trans-thiophenyl-p-coumarate model chromophore has an absorption maximum at 460 nm, whereas the photoactive yellow protein absorbs maximally at 446 nm. The protein environment thus only slightly blue-shifts the absorption. In contrast, the absorption of the model chromophore in aqueous solution is significantly blue-shifted (lambda(max) = 395 nm). A deprotonated trans-p-coumaric acid has also been studied to elucidate the effect of thioester formation and phenol deprotonation. The sum of these two changes on the chromophore induces a red shift both in vacuum and in aqueous solution.
Threshold photoelectron spectra (TPES) of the isotopomers of the methyl radical (CH(3), CH(2)D, CHD(2), and CD(3)) have been recorded in the 9.5-10.5 eV VUV photon energy range using third generation synchrotron radiation to investigate the vibrational spectroscopy of the corresponding cations at a 7-11 meV resolution. A threshold photoelectron-photoion coincidence (TPEPICO) spectrometer based on velocity map imaging and Wiley-McLaren time-of-flight has been used to simultaneously record the TPES of several radical species produced in a Ar-seeded beam by dc flash-pyrolysis of nitromethane (CH(x)D(y)NO(2), x + y = 3). Vibrational bands belonging to the symmetric stretching and out-of-plane bending modes have been observed and P, Q, and R branches have been identified in the analysis of the rotational profiles. Vibrational configuration interaction (VCI), in conjunction with near-equilibrium potential energy surfaces calculated by the explicitly correlated coupled cluster method CCSD(T*)-F12a, is used to calculate vibrational frequencies for the four radical isotopomers and the corresponding cations. Agreement with data from high-resolution IR spectroscopy is very good and a large number of predictions is made. In particular, the calculated wavenumbers for the out-of-plane bending vibrations, nu(2)(CH(3)(+)) = 1404 cm(-1), nu(4)(CH(2)D(+)) = 1308 cm(-1), nu(4)(CHD(2)(+)) = 1205 cm(-1), and nu(2)(CD(3)(+)) = 1090 cm(-1), should be accurate to ca. 2 cm(-1). Additionally, computed Franck-Condon factors are used to estimate the importance of autoionization relative to direct ionization. The chosen models globally account for the observed transitions, but in contrast to PES spectroscopy, evidence for rotational and vibrational autoionization is found. It is shown that state-selected methyl cations can be produced by TPEPICO spectroscopy for ion-molecule reaction studies, which are very important for the understanding of the planetary ionosphere chemistry.
A pyrolysis source coupled to a supersonic expansion has been used to produce the CH3 radical from two precursors, iodomethane CH3I and nitromethane CH3NO2. The relative ionization yield of CH3 has been recorded at the SOLEIL Synchrotron Radiation source in the range 9.0-11.6 eV, and its ionization threshold has been modeled by taking into account the vibrational and rotational temperature of the radical in the molecular beam. The relative photoionization yield has been normalized to an absolute cross section scale at a fixed wavelength (118.2 nm, sigma(i)(CH3) = 6.7(-1.8)(+2.4) Mb, 95% confidence interval) in an independent laboratory experiment using the same pyrolysis source, a vacuum ultraviolet (VUV) laser, and a carefully calibrated detection chain. The resulting absolute cross section curve is in good agreement with the recently published measurements by Taatjes et al., although with an improved signal-to-noise ratio. The absolute photoionization cross section of CH3I at 118.2 nm has also been measured to be sigma(i)(CH3I) = (48.2 +/- 7.9) Mb, in good agreement with previous electron impact measurements. Finally, the photoionization yield of the iodine atom in its ground state 2P(3/2) has been recorded using the synchrotron source and calibrated for the first time on an absolute cross section scale from our fixed 118.2 nm laser measurement, sigma(i)(I2P(3/2)) = 74(-23)(+33) Mb (95% confidence interval). The ionization curve of atomic iodine is in good agreement, although with slight variations, with the earlier relative ionization yield measured by Berkowitz et al. and is also compared to an earlier calculation of the iodine cross section by Robicheaux and Greene. It is demonstrated that, in the range of pyrolysis temperature used in this work, all the ionization cross sections are temperature-independent. Systematic care has been taken to include all uncertainty sources contributing to the final confidence intervals for the reported results.
Methane photolysis has been performed at the two Vacuum UltraViolet (VUV) wavelengths, 121.6 nm and 118.2 nm, via a spectrally pure laser pump-probe technique. The first photon is used to dissociate methane (either at 121.6 nm or at 118.2 nm) and the second one is used to ionise the CH(2) and CH(3) fragments. The radical products, CH(3)(X), CH(2)(X), CH(2)(a) and C((1)D), have been selectively probed by mass spectrometry. In order to quantify the fragment quantum yields from the mass spectra, the photoionisation cross sections have been carefully evaluated for the CH(2) and CH(3) radicals, in two steps: first, theoretical ab initio approaches have been used in order to determine the pure electronic photoionisation cross sections of CH(2)(X) and CH(2)(a), and have been rescaled with respect to the measured absolute photoionisation cross section of the CH(3)(X) radical. In a second step, in order to take into account the substantial vibrational energy deposited in the CH(3)(X) and CH(2)(a) radicals, the variation of their cross sections near threshold has been simulated by introducing the pertinent Franck-Condon overlaps between neutral and cation species. By adding the interpolated values of CH quantum yields measured by Rebbert and Ausloos [J. Photochem., 1972, 1, 171-176], a complete set of fragment quantum yields has been derived for the methane photodissociation at 121.6 nm, with carefully evaluated 1σ uncertainties: Φ[CH(3)(X)] = 0.42 ± 0.05, Φ[CH(2)(a)] = 0.48 ± 0.05, Φ[CH(2)(X)] = 0.03 ± 0.08, Φ[CH(X)] = 0.07 ± 0.01. These new data have been measured independently of the H atom fragment quantum yield, subject to many controversies in the literature. From our results, we evaluate Φ(H) = 0.55 ± 0.17 at 121.6 nm. The quantum yields for the photolysis at 118.2 nm differ notably from those measured at 121.6 nm, with a substantial production of the CH(2)(X) fragment: Φ[CH(3)(X)] = 0.26 ± 0.04, Φ[CH(2)(a)] = 0.17 ± 0.05, Φ[CH(2)(X)] = 0.48 ± 0.06, Φ[CH(X)] = 0.09 ± 0.01, Φ(H) = 1.31 ± 0.13. These new data should bring reliable and essential inputs for the photochemical models of the Titan atmosphere.
UV laser excitation of cryogenic solids doped with cyanoethyne, HC(3)N, led to an in situ creation of longer carbon-nitrogen chains, namely HC(5)N, C(4)N(2), and C(6)N(2), heralded by their strong visible luminescence. HC(5)N and C(4)N(2) molecules can form, most probably, within HC(3)N aggregates linked by hydrogen bonds, while the reaction occurring between two isolated, photochemically created C(3)N radicals yields C(6)N(2). This latter species, dicyanobutadiyne, is easily detected in Ar, Kr, N(2), as well as in parahydrogen solids. The C(6)N(2) phosphorescence is identified here for the first time. The reported carbon chain coupling reactions in rigid environments are of interest for astrochemistry of interstellar ices.
The absolute photoionization cross section of C(2)H(5) has been measured at 10.54 eV using vacuum ultraviolet (VUV) laser photoionization. The C(2)H(5) radical was produced in situ using the rapid C(2)H(6) + F → C(2)H(5) + HF reaction. Its absolute photoionization cross section has been determined in two different ways: first using the C(2)H(5) + NO(2) → C(2)H(5)O + NO reaction in a fast flow reactor, and the known absolute photoionization cross section of NO. In a second experiment, it has been measured relative to the known absolute photoionization cross section of CH(3) as a reference by using the CH(4) + F → CH(3) + HF and C(2)H(6) + F → C(2)H(5) + HF reactions successively. Both methods gave similar results, the second one being more precise and yielding the value: σ(C(2)H(5))(ion) = (5.6 ± 1.4) Mb at 10.54 eV. This value is used to calibrate on an absolute scale the photoionization curve of C(2)H(5) produced in a pyrolytic source from the C(2)H(5)NO(2) precursor, and ionized by the VUV beam of the DESIRS beamline at SOLEIL synchrotron facility. In this latter experiment, a recently developed ion imaging technique is used to discriminate the direct photoionization process from dissociative ionization contributions to the C(2)H(5)(+) signal. The imaging technique applied on the photoelectron signal also allows a slow photoelectron spectrum with a 40 meV resolution to be extracted, indicating that photoionization around the adiabatic ionization threshold involves a complex vibrational overlap between the neutral and cationic ground states, as was previously observed in the literature. Comparison with earlier photoionization studies, in particular with the photoionization yield recorded by Ruscic et al. is also discussed.
We present new high-resolution data on the photoionization of the 2-butyn-1-yl radical (CH3CC–•CH2) formed by H atom abstraction from 2-butyne by F atoms. The spectra were recorded from 7.7 to 11 eV by using double-imaging, photoelectron–photoion coincidence spectroscopy, which allows the unambiguous correlation of photoelectron data and the mass of the species. The photoionization spectrum shows significant resonant autoionizing structure converging to excited states of the C4H5 + cation, similar to what is observed in the closely related propargyl radical (HCC–•CH2). The threshold photoelectron spectrum, obtained with a resolution of 17 meV, is also reported. This spectrum is consistent with previous measurements of the first photoionization band but has been extended to higher energy to allow the observation of bands corresponding to excited electronic states of the ion. A refined value of the adiabatic ionization energy is extracted: IE(C4H5) = 7.93 ± 0.01 eV. A determination of the absolute photoionization cross section of the 2-butyn-1-yl radical at 9.7 eV is also reported: σion(C4H5) = 6.1 ± 1.8 Mb.
The A-X bands of the CH radical, produced in a 248 nm two-photon photolysis or in a supersonic jet discharge of CHBr(3), have been observed via cavity ring-down absorption spectroscopy. Bromoform is a well-known photolytic source of CH radicals, though no quantitative measurement of the CH production efficiency has yet been reported. The aim of the present work is to quantify the CH production from both photolysis and discharge of CHBr(3). In the case of photolysis, the range of pressure and laser fluences was carefully chosen to avoid postphotolysis reactions with the highly reactive CH radical. The CH production efficiency at 248 nm has been measured to be Phi=N(CH)N(CHBr(3))=(5.0+/-2.5)10(-4) for a photolysis laser fluence of 44 mJ cm(-2) per pulse corresponding to a two-photon process only. In addition, the internal energy distribution of CH(X (2)Pi) has been obtained, and thermalized population distributions have been simulated, leading to an average vibrational temperature T(vib)=1800+/-50 K and a rotational temperature T(rot)=300+/-20 K. An alternative technique for producing the CH radical has been tested using discharge-induced dissociation of CHBr(3) in a supersonic expansion. The CH product was analyzed using the same cavity ring-down spectroscopy setup. The production of CH by discharge appears to be as efficient as the photolysis technique and leads to rotationally relaxed radicals.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
hi@scite.ai
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.