In this paper, we addressed the flow patterns over a light boxplane scale model to explain the previously discovered disagreement between its predicted and experimental aerodynamic characteristics. By tuft flow and CFD visualization, we explored the causes yielding a large zero lift pitching moment coefficient, lateral divergence, difference in fore and aft elevator lift, and poor high lift performance of the aircraft. The investigation revealed that the discrepancy in the pitching moment coefficient and lateral stability derivatives can be attributed to insufficient accuracy of the used predictive methods. The difference in fore and aft elevator lift and poor high lift performance of the aircraft may occur due to the low local Reynolds number, which causes the early flow separation over the elevators and flaperons when deflected downward at angles exceeding 10°. Additionally, some airframe changes are suggested to alleviate the lateral divergence of the model.