Fluid flows that are smooth at low speeds become unstable and then turbulent at higher speeds. This phenomenon has traditionally been investigated by linearizing the equations of flow and testing for unstable eigenvalues of the linearized problem, but the results of such investigations agree poorly in many cases with experiments. Nevertheless, linear effects play a central role in hydrodynamic instability. A reconciliation of these findings with the traditional analysis is presented based on the "pseudospectra" of the linearized problem, which imply that small perturbations to the smooth flow may be amplified by factors on the order of 10(5) by a linear mechanism even though all the eigenmodes decay monotonically. The methods suggested here apply also to other problems in the mathematical sciences that involve nonorthogonal eigenfunctions.

A software suite consisting of 17 MATLAB functions for solving differential equations by the spectral collocation (i.e., pseudospectral) method is presented. It includes functions for computing derivatives of arbitrary order corresponding to Chebyshev, Hermite, Laguerre, Fourier, and sinc interpolants. Auxiliary functions are included for incorporating boundary conditions, performing interpolation using barycentric formulas, and computing roots of orthogonal polynomials. It is demonstrated how to use the package for solving eigenvalue, boundary value, and initial value problems arising in the fields of special functions, quantum mechanics, nonlinear waves, and hydrodynamic stability.

In recent work it has been shown that there can be substantial transient growth in the energy of small perturbations to plane Poiseuille and Couette flows if the Reynolds number is below the critical value predicted by linear stability analysis. This growth, which may be as large as O(1000), occurs in the absence of nonlinear effects and can be explained by the non-normality of the governing linear operator - that is, the non-orthogonality of the associated eigenfunctions. In this paper we study various aspects of this energy growth for two- and three-dimensional Poiseuille and Couette flows using energy methods, linear stability analysis, and a direct numerical procedure for computing the transient growth. We examine conditions for no energy growth, the dependence of the growth on the streamwise and spanwise wavenumbers, the time dependence of the growth, and the effects of degenerate eigenvalues. We show that the maximum transient growth behaves like O(R2), where R is the Reynolds number. We derive conditions for no energy growth by applying the Hille–Yosida theorem to the governing linear operator and show that these conditions yield the same results as those derived by energy methods, which can be applied to perturbations of arbitrary amplitude. These results emphasize the fact that subcritical transition can occur for Poiseuille and Couette flows because the governing linear operator is non-normal.