. Purpose: The outbreak of COVID-19 or coronavirus was first reported in 2019. It has widely and rapidly spread around the world. The detection of COVID-19 cases is one of the important factors to stop the epidemic, because the infected individuals must be quarantined. One reliable way to detect COVID-19 cases is using chest x-ray images, where signals of the infection are located in lung areas. We propose a solution to automatically classify COVID-19 cases in chest x-ray images. Approach: The ResNet-101 architecture is adopted as the main network with more than 44 millions parameters. The whole net is trained using the large size of x-ray images. The heatmap under the region of interest of segmented lung is constructed to visualize and emphasize signals of COVID-19 in each input x-ray image. Lungs are segmented using the pretrained U-Net. The confidence score of being COVID-19 is also calculated for each classification result. Results: The proposed solution is evaluated based on COVID-19 and normal cases. It is also tested on unseen classes to validate a regularization of the constructed model. They include other normal cases where chest x-ray images are normal without any disease but with some small remarks, and other abnormal cases where chest x-ray images are abnormal with some other diseases containing remarks similar to COVID-19. The proposed method can achieve the sensitivity, specificity, and accuracy of 97%, 98%, and 98%, respectively. Conclusions: It can be concluded that the proposed solution can detect COVID-19 in a chest x-ray image. The heatmap and confidence score of the detection are also demonstrated, such that users or human experts can use them for a final diagnosis in practical usages.

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Background: Nipah virus (NiV) is a fatal zoonotic agent that was first identified amongst pig farmers in Malaysia in 1998, in an outbreak that resulted in 105 fatal human cases. That epidemic arose from a chain of infection, initiating from bats to pigs, and which then spilled over from pigs to humans. In Thailand, bat-pig-human communities can be observed across the country, particularly in the central plain. The present study therefore aimed to identify highrisk areas for potential NiV outbreaks and to model how the virus is likely to spread. Multi-criteria decision analysis (MCDA) and weighted linear combination (WLC) were employed to produce the NiV risk map. The map was then overlaid with the nationwide pig movement network to identify the index subdistricts in which NiV may emerge. Subsequently, susceptible-exposed-infectious-removed (SEIR) modeling was used to simulate NiV spread within each subdistrict, and network modeling was used to illustrate how the virus disperses across subdistricts. Results: Based on the MCDA and pig movement data, 14 index subdistricts with a high-risk of NiV emergence were identified. We found in our infectious network modeling that the infected subdistricts clustered in, or close to the central plain, within a range of 171 km from the source subdistricts. However, the virus may travel as far as 528.5 km (R 0 = 5). Conclusions: In conclusion, the risk of NiV dissemination through pig movement networks in Thailand is low but not negligible. The risk areas identified in our study can help the veterinary authority to allocate financial and human resources to where preventive strategies, such as pig farm regionalization, are required and to contain outbreaks in a timely fashion once they occur.

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MRI reconstruction is one of the critical processes of MRI machines, along with the acquisition. Due to a slow processing time of signal acquiring, parallel imaging and reconstruction techniques are applied for acceleration. To accelerate the acquisition process, fewer raw data are sampled simultaneously with all RF coils acquisition. Then, the reconstruction uses under-sampled data from all RF coils to restore the final MR image that resembles the fully sampled MR image. These processes have been a traditional procedure inside the MRI system since the invention of the multi-coils MRI machine. This paper proposes the deep learning technique with a lightweight network. The deep neural network is capable of generating the high-quality reconstructed MR image with a high peak signal-to-noise ratio (PSNR). This also opens a high acceleration factor for MR data acquisition. The lightweight network is called Multi-Level Pooling Encoder–Decoder Net (MLPED Net). The proposed network outperforms the traditional encoder–decoder networks on 4-fold acceleration with a significant margin on every evaluation metric. The network can be trained end-to-end, and it is a lightweight structure that can reduce training time significantly. Experimental results are based on a publicly available MRI Knee dataset from the fastMRI competition.

PurposeThis paper aims to propose a solution for detecting and grading diabetic retinopathy (DR) in retinal images using a convolutional neural network (CNN)-based approach. It could classify input retinal images into a normal class or an abnormal class, which would be further split into four stages of abnormalities automatically.Design/methodology/approachThe proposed solution is developed based on a newly proposed CNN architecture, namely, DeepRoot. It consists of one main branch, which is connected by two side branches. The main branch is responsible for the primary feature extractor of both high-level and low-level features of retinal images. Then, the side branches further extract more complex and detailed features from the features outputted from the main branch. They are designed to capture details of small traces of DR in retinal images, using modified zoom-in/zoom-out and attention layers.FindingsThe proposed method is trained, validated and tested on the Kaggle dataset. The regularization of the trained model is evaluated using unseen data samples, which were self-collected from a real scenario from a hospital. It achieves a promising performance with a sensitivity of 98.18% under the two classes scenario.Originality/valueThe new CNN-based architecture (i.e. DeepRoot) is introduced with the concept of a multi-branch network. It could assist in solving a problem of an unbalanced dataset, especially when there are common characteristics across different classes (i.e. four stages of DR). Different classes could be outputted at different depths of the network.

<span lang="EN-US">One reliable way of detecting coronavirus disease 2019 (COVID-19) is using a chest x-ray image due to its complications in the lung parenchyma. This paper proposes a solution for COVID-19 detection in chest x-ray images based on a convolutional neural network (CNN). This CNN-based solution is developed using a modified InceptionV3 as a backbone architecture. Self-attention layers are inserted to modify the backbone such that the number of trainable parameters is reduced and meaningful areas of COVID-19 in chest x-ray images are focused on a training process. The proposed CNN architecture is then learned to construct a model to classify COVID-19 cases from non-COVID-19 cases. It achieves sensitivity, specificity, and accuracy values of 93%, 96%, and 96%, respectively. The model is also further validated on the so-called other normal and abnormal, which are non-COVID-19 cases. Cases of other normal contain chest x-ray images of elderly patients with minimal fibrosis and spondylosis of the spine, whereas other abnormal cases contain chest x-ray images of tuberculosis, pneumonia, and pulmonary edema. The proposed solution could correctly classify them as non-COVID-19 with 92% accuracy. This is a practical scenario where non-COVID-19 cases could cover more than just a normal condition.</span>