Highlights d Cities possess a consistent ''core'' set of non-human microbes d Urban microbiomes echo important features of cities and city-life d Antimicrobial resistance genes are widespread in cities d Cities contain many novel bacterial and viral species
This study represents the first characterization of sand microbiota in migrating barchan sand dunes. Bacterial communities were studied through direct counts and cultivation, as well as 16S rRNA gene and metagenomic sequence analysis to gain an understanding of microbial abundance, diversity, and potential metabolic capabilities. Direct on-grain cell counts gave an average of 5.3 ± 0.4 x 105 cells g-1 of sand. Cultured isolates (N = 64) selected for 16S rRNA gene sequencing belonged to the phyla Actinobacteria (58%), Firmicutes (27%) and Proteobacteria (15%). Deep-sequencing of 16S rRNA gene amplicons from 18 dunes demonstrated a high relative abundance of Proteobacteria, particularly enteric bacteria, and a dune-specific-pattern of bacterial community composition that correlated with dune size. Shotgun metagenome sequences of two representative dunes were analyzed and found to have similar relative bacterial abundance, though the relative abundances of eukaryotic, viral and enterobacterial sequences were greater in sand from the dune closer to a camel-pen. Functional analysis revealed patterns similar to those observed in desert soils; however, the increased relative abundance of genes encoding sporulation and dormancy are consistent with the dune microbiome being well-adapted to the exceptionally hyper-arid Qatari desert.
Agriculture has played an essential role in the provision of food and has been a major factor in overall economic development for societies around the world for millennia. In the past, agriculture in hot, arid countries like Qatar faced many challenges, the primary one being a dearth of water for irrigation. Historically this severely limited Qatar’s economic development, which was based largely on resource exploitation, pearl fishing, and only more recently, on the exploitation of its oil and gas reserves which subsequently has led to Qatar’s great wealth. This paper gives an overview of the recent evolution of Qatar’s agricultural sector and investigates future trends that tackle the challenges of its hot arid climate and the limited availability of agricultural resources. Specifically, the review analyses Qatar’s potential to develop a national food security strategy based on a significant expansion of food production in the country. We review recent policy actions implemented to address challenges in the food supply chain caused by a 3.5-year blockade imposed by the adjacent Arab Gulf States, discussing the renewed interest in the potential that an enhanced agricultural sector must provide some aspects of food security and the implications for policymakers that would logically ensue.
Urease-producing microbes are of significance due to their potential application in biocement production. Sporosarcina koreensis Q1 is a urease-producing bacterium belonging to the phylum Firmicutes. Here, we present the draft whole-genome sequence of S. koreensis Q1, isolated from a barchan sand dune in Qatar.
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