In the present study, to contribute to the understanding of the evolutionary history of sheep, the mitochondrial (mt) DNA polymorphisms occurring in modern Turkish native domestic (n = 628), modern wild (Ovis gmelinii anatolica) (n = 30) and ancient domestic sheep from Oylum Höyük in Kilis (n = 33) were examined comparatively with the accumulated data in the literature. The lengths (75 bp/76 bp) of the second and subsequent repeat units of the mtDNA control region (CR) sequences differentiated the five haplogroups (HPGs) observed in the domestic sheep into two genetic clusters as was already implied by other mtDNA markers: the first cluster being composed of HPGs A, B, D and the second cluster harboring HPGs C, E.To manifest genetic relatedness between wild Ovis gmelinii and domestic sheep haplogroups, their partial cytochrome B sequences were examined together on a median-joining network. The two parallel but wider aforementioned clusters were observed also on the network of Ovis gmelenii individuals, within which domestic haplogroups were embedded. The Ovis gmelinii wilds of the present day appeared to be distributed on two partially overlapping geographic areas parallel to the genetic clusters that they belong to (the first cluster being in the western part of the overall distribution). Thus, the analyses suggested that the domestic sheep may be the products of two maternally distinct ancestral Ovis gmelinii populations.Furthermore, Ovis gmelinii anatolica individuals exhibited a haplotype of HPG A (n = 22) and another haplotype (n = 8) from the second cluster which was not observed among the modern domestic sheep. HPG E, with the newly observed members (n = 11), showed signs of expansion. Studies of ancient and modern mtDNA suggest that HPG C frequency increased in the Southeast Anatolia from 6% to 22% some time after the beginning of the Hellenistic period, 500 years Before Common Era (BCE).

We determined the crossover (CO) distribution, frequency and genomic sequences involved in interspecies meiotic recombination by using parent-assigned variants of 52 F recombinant inbred lines obtained from a cross between tomato, Solanum lycopersicum, and its wild relative, Solanum pimpinellifolium. The interspecific CO frequency was 80% lower than reported for intraspecific tomato crosses. We detected regions showing a relatively high and low CO frequency, so-called hot and cold regions. Cold regions coincide to a large extent with the heterochromatin, although we found a limited number of smaller cold regions in the euchromatin. The CO frequency was higher at the distal ends of chromosomes than in pericentromeric regions and higher in short arm euchromatin. Hot regions of CO were detected in euchromatin, and COs were more often located in non-coding regions near the 5' untranslated region of genes than expected by chance. Besides overrepresented CCN repeats, we detected poly-A/T and AT-rich motifs enriched in 1-kb promoter regions flanking the CO sites. The most abundant sequence motifs at CO sites share weak similarity to transcription factor-binding sites, such as for the C2H2 zinc finger factors class and MADS box factors, while InterPro scans detected enrichment for genes possibly involved in the repair of DNA breaks.

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Soil management systems can have great effect on soil chemical, physical and biological properties. Conversion of forest to grassland and cropland can alter C and N dynamics. The objective of this study was to evaluate the changes in aggregate‐associated and labile soil organic C and N fractions after conversion of a natural forest to grassland and cropland in northern Turkey. This experiment was conducted on plots subject to three different adjacent land uses (forest, grassland and cropland). Soil samples were taken from 0–5, 5–15 and 15–30 cm depths from each land use. Some soil physical (soil texture, bulk density), chemical (soil pH, soil organic matter, lime content, total organic C and N, inorganic N, free and protected organic C) and biological (microbial biomass C and N, mineralizable C and N) properties were measured. The highest and lowest bulk densities were observed in grassland (1.41 g cm−3) and cropland (1.14 g cm−3), respectively. Microbial biomass C and total organic C in forest were almost twice greater than grassland and four‐times greater than cropland. Cultivation of forest reduced total organic N, mineralizable N and microbial biomass N by half. The great portion of organic C was stored in macroaggregates (>250 µm) in all the three land uses. Free organic C comprised smaller portion of soil organic C in all the three land uses. Thus, this study indicated that long‐term conversion of forest to grassland and cropland significantly decreased microbial biomass C, mineralizable C and physically protected organic C and the decreases were the greatest in cropland. Copyright © 2011 John Wiley & Sons, Ltd.

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