A paradigm in carbon cycling science predicts that sea-level rise will enhance carbon accumulation in an apparent negative carbon-climate feedback1,2. However, ecosystems exposed to combinations of stressors and subsidies – such as saltwater intrusion and sea-level rise – may adapt, transition to an alternative state, or experience a decline in functions, such as carbon storage, thereby altering their response trajectories to environmental changes3,4. Climate change is increasing salinity in coastal ecosystems worldwide yet the effects on ecosystem metabolism remain uncertain4-8. Here, we synthesized gross ecosystem productivity (GEP), ecosystem respiration [CO2 and CH4 (ERCO2 and ERCH4)], and net ecosystem productivity (NEP) from diverse coastal marshes exposed to experimental additions and observational gradients in salinity. Increases in salinity generally caused decreases in median GEP, ERCO2, and ERCH4 but increases in GEP and NEP from ~5 to 10 ppt. Increased saltwater intrusion can stimulate or stress wetlands based on relative exposure and acclimation to increased salinities, and we detected positive NEP where salinity increases had greater negative effects on ERCO2 and ERCH4 than GEP. Although increases in NEP are detectable at low salinities, saltwater intrusion and climate-driven disturbances may reduce carbon storage capacity of coastal ecosystems as productivity declines toward higher salinities.
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