Quantitative analysis of blood vessel wall structures is important to study atherosclerotic diseases and assess cardiovascular event risks. To achieve this, accurate identification of vessel luminal and outer wall contours is needed. Computer-assisted tools exist, but manual preprocessing steps, such as region of interest identification and/or boundary initialization, are still needed. In addition, prior knowledge of the ring shape of vessel walls has not been fully explored in designing segmentation methods. In this work, a fully automated artery localization and vessel wall segmentation system is proposed. A tracklet refinement algorithm was adapted to robustly identify the artery of interest from a neural network-based artery centerline identification architecture. Image patches were extracted from the centerlines and converted in a polar coordinate system for vessel wall segmentation. The segmentation method used 3D polar information and overcame problems such as contour discontinuity, complex vessel geometry, and interference from neighboring vessels. Verified by a large (>32000 images) carotid artery dataset collected from multiple sites, the proposed system was shown to better automatically segment the vessel wall than traditional vessel wall segmentation methods or standard convolutional neural network approaches. In addition, a segmentation uncertainty score was estimated to effectively identify slices likely to have errors and prompt manual confirmation of the segmentation. This robust vessel wall segmentation system has applications in different vascular beds and will facilitate vessel wall feature extraction and cardiovascular risk assessment.
In agriculture, pest always causes the major damage in fields and results in significant crop yield losses. Currently, manual pest classification and counting are very time-consuming and many subjective factors can affect the population counting accuracy. In addition, the existing pest localization and recognition methods based on Convolutional Neural Network (CNN) are not satisfactory for practical pest prevention in fields because of pests' different scales and attitudes. In order to address these problems, an effective data augmentation strategy for CNN-based method is proposed in this paper. In training phase, we adopt data augmentation through rotating images by various degrees followed by cropping into different grids. In this way, we could obtain a large number of extra multi-scale examples that could be adopted to train a multi-scale pest detection model. In terms of test phase, we utilize the test time augmentation (TTA) strategy that separately inferences input images with various resolutions using the trained multi-scale model. Finally, we fuse these detection results from different image scales by non-maximum suppression (NMS) for the final result. Experimental results on wheat sawfly, wheat aphid, wheat mite and rice planthopper in our domain specific dataset, show that our proposed data augmentation strategy achieves the pest detection performance of 81.4% mean Average Precision (mAP), which improves 11.63%, 7.93% ,4.73% compared to three stateof-the-art approaches.
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