Compartments in food webs are subgroups of taxa in which many strong interactions occur within the subgroups and few weak interactions occur between the subgroups. Theoretically, compartments increase the stability in networks, such as food webs. Compartments have been difficult to detect in empirical food webs because of incompatible approaches or insufficient methodological rigour. Here we show that a method for detecting compartments from the social networking science identified significant compartments in three of five complex, empirical food webs. Detection of compartments was influenced by food web resolution, such as interactions with weights. Because the method identifies compartmental boundaries in which interactions are concentrated, it is compatible with the definition of compartments. The method is rigorous because it maximizes an explicit function, identifies the number of non-overlapping compartments, assigns membership to compartments, and tests the statistical significance of the results. A graphical presentation reveals systemic relationships and taxa-specific positions as structured by compartments. From this graphic, we explore two scenarios of disturbance to develop a hypothesis for testing how compartmentalized interactions increase stability in food webs.
The full suite of carbon exchanges among the 36 most important components of the Chesapeake Bay mesohaline ecosystem is estimated to examine the seasonal trends in energy flow and the trophic dynamics of the ecosystem. The networks provide information on the rates of energy transfer between the trophic components in a system wherein autochthonous production is dominated by phytoplankton production. A key seasonal feature of the system is that the summer grazing of primary producers by zooplankton is greatly reduced due to top—down control of zooplankton by ctenophores and sea nettles. Some of the ungrazed phytoplankton is left to fuel the activities of the pelagic microbial community, and the remainder falls to the bottom where it augments the deposit—feeding assemblage of polychaetes, amphipods, and blue crabs. There is a dominant seasonal cycle in the activities of all subcommunities, which is greatest in the summer and least in the cold season. However, the overall topology of the ecosystem does not appear to change substantially from season to season. Matrix operations can be employed to assess the various direct and indirect pathways by which each trophic group obtains energy. Often, indirect linkages reveal interesting differences. For example, although the bluefish and striped bass are both piscivorous predators, 63% of bluefish intake depends indirectly on benthic organisms, whereas striped bass depends mainly on planktonic organisms. Nearly all higher trophic species exhibit significant indirect dependencies upon the upper components of the microbial loop, especially during summer. The complicated trophic network can be mapped into an eight—level trophic chain in the sense of Lindeman. Such analysis reveals that detritivory is about 10 times greater than herbivorous grazing in the Chesapeake system and that 70% of detritus results from internal recycle. Annual efficiencies of trophic levels decrease as one ascends the chain. Major seasonal shifts in trophic efficiencies at higher levels appear to be modulated by how effectively microscopic zooplankton (mostly ciliates) are cropped by their predators. Average trophic efficiency is 9.6%. Despite the existence of eight trophic levels, the average level at which each species feeds always remains below 5. One "pest" species (the coelenterate Chrysaora quinquecirrha) feeds rather high on the trophic pyramid and may exert a heretofore unappreciated level of control on the planktonic food chain. The number of cycles present in the network is surprisingly few, despite the fact that a relatively large and seemingly constant amount (23.2%) of total system activity is devoted to recycling. This combination of factors possibly indicates a stressed ecosystem. A study of the rate—limiting links in the seasonal networks of recycling of material within the plankton reconfirms the shift of predator control from crustaceous zooplankton in springtime to the sea nettle (Chrysaora quinquecirrha) during summer months. The collection of cycles present in the system is disjoint; ...
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