Apolipoprotein E (apoE) genotype has a major influence on the risk for Alzheimer disease (AD). Different apoE isoforms may alter AD pathogenesis via their interactions with the amyloid -peptide (A).Amyloid precursor protein (APP) C-terminal fragments were not different between Abca1 genotypes prior to plaque deposition in 3-month-old PDAPP mice, suggesting that deletion of Abca1 did not affect APP processing or A production. As expected, 3-monthold PDAPP Abca1 ؊/؊ mice had decreased apoE levels, but they also had a higher percentage of carbonate-insoluble apoE, suggesting that poorly lipidated apoE is less soluble in vivo. We also found that 12-month-old PDAPP Abca1 ؊/؊ mice had a higher percentage of carbonate-insoluble apoE and that apoE deposits co-localize with amyloid plaques, demonstrating that poorly lipidated apoE co-deposits with insoluble A. Together, these data suggest that despite substantially lower apoE levels, poorly lipidated apoE produced in the absence of ABCA1 is strongly amyloidogenic in vivo.Apolipoprotein E (apoE) 2 genotype is a strong determinant of risk for Alzheimer disease (AD) and cerebral amyloid angiopathy (CAA) (1-3). Relative to subjects with the more common ⑀3 allele of apoE, subjects with one or more ⑀4 alleles have a higher risk for AD and CAA, whereas subjects with one or more ⑀2 alleles have a decreased risk for AD (2, 4). Evidence suggests that the mechanism by which different apoE alleles affect the pathogenesis of AD and CAA is by modifying interactions between apoE and the amyloid -peptide (A), which aggregates and deposits into the amyloid plaques that are thought to initiate AD and CAA pathogenesis (5, 6). ApoE may act as a chaperone for A by binding the peptide and altering its conformation, thereby influencing its clearance and ability to aggregate (7). Evidence supporting the role of apoE as an A chaperone comes from a wide range of experiments. ApoE isoforms and levels affect the aggregation, fibrillogenesis, clearance, and degradation of A in cell-free, cell-based, and tissue-based experiments (6, 8 -11).Studies have also shown a profound effect of apoE on A deposition and conformation in vivo. The PDAPP and Tg2576 transgenic mouse models of AD, which overexpress the human amyloid precursor protein (APP) containing AD-causing mutations, develop several aspects of AD-like pathology beginning at 6 -9 months of age, including diffuse and fibrillar A deposits, neuritic plaques, gliosis, and CAA (12, 13). When Tg2576 and PDAPP mice were bred to animals lacking murine apoE, the Tg2576 Apoe Ϫ/Ϫ , and PDAPP Apoe Ϫ/Ϫ mice developed much less A deposition, almost no fibrillar A deposits or neuritic plaques, and no CAA (14 -17). These effects were dose-dependent such that Apoe ϩ/Ϫ mice had less than 50% as much A-related pathology as Apoe ϩ/ϩ mice (14, 17). These findings demonstrate that murine apoE strongly promotes A-related pathology in vivo. The influence of apoE type and the levels on A behavior in many different systems supports the hypothesis that apoE...