Poplars are fast-growing, high-yielding forest tree species, whose cultivation as second-generation biofuel crops is of increasing interest and can efficiently meet emission reduction goals. Yet, breeding elite poplar trees for drought resistance remains a major challenge. Worldwide breeding programs are largely focused on intra/interspecific hybridization, whereby Populus nigra L. is a fundamental parental pool. While high-throughput genotyping has resulted in unprecedented capabilities to rapidly decode complex genetic architecture of plant stress resistance, linking genomics to phenomics is hindered by technically challenging phenotyping. Relying on unmanned aerial vehicle (UAV)-based remote sensing and imaging techniques, high-throughput field phenotyping (HTFP) aims at enabling highly precise and efficient, non-destructive screening of genotype performance in large populations. To efficiently support forest-tree breeding programs, ground-truthing observations should be complemented with standardized HTFP. In this study, we develop a high-resolution (leaf level) HTFP approach to investigate the response to drought of a full-sib F2 partially inbred population (termed here ‘POP6’), whose F1 was obtained from an intraspecific P. nigra controlled cross between genotypes with highly divergent phenotypes. We assessed the effects of two water treatments (well-watered and moderate drought) on a population of 4603 trees (503 genotypes) hosted in two adjacent experimental plots (1.67 ha) by conducting low-elevation (25 m) flights with an aerial drone and capturing 7836 thermal infrared (TIR) images. TIR images were undistorted, georeferenced, and orthorectified to obtain radiometric mosaics. Canopy temperature (Tc) was extracted using two independent semi-automated segmentation techniques, eCognition- and Matlab-based, to avoid the mixed-pixel problem. Overall, results showed that the UAV platform-based thermal imaging enables to effectively assess genotype variability under drought stress conditions. Tc derived from aerial thermal imagery presented a good correlation with ground-truth stomatal conductance (gs) in both segmentation techniques. Interestingly, the HTFP approach was instrumental to detect drought-tolerant response in 25% of the population. This study shows the potential of UAV-based thermal imaging for field phenomics of poplar and other tree species. This is anticipated to have tremendous implications for accelerating forest tree genetic improvement against abiotic stress.
Earth observation (EO) data, derived from remote sensing and unmanned aerial vehicle (UAV), have been recently demonstrated to be essential tools for the ecosystem monitoring and habitat mapping, combining high technological and methodological procedures for applied ecology. However, research based on EO data analyses often tend to focus on image processing techniques, neglecting the development of a detailed sampling design scheme needed for an exhaustive habitat detection. This paper shows the results of a novel approach for mapping coastal dune habitats at a fine scale, using a supervised machine learning model, through the combination of vegetation plot sampling scheme, synergic use of multi-sensor spectral imagery (UAV-VHR) and environmental predictors (e.g., LiDAR), object-based image analysis, and landscape metrics analysis. Proposed approach was tested in a protected area, established to preserve notable habitats along the Italian Tyrrhenian coast. A detailed sampling scheme was designed and carried out during spring and summer of 2019, combining simultaneously UAV flight acquisition and field vegetation survey data, collected at high precision positioning. The calibrated classification model achieved an overall accuracy of 78.6% (standard error 4.33), allowing us to accurately classify and map five coastal habitats, according to EUNIS (European Nature Information System) classification, which were further verified through a fully independent validation field survey. Results demonstrate that VHR imageries, combined with specific field survey schemes, can be exploited to train classification models used for the detection of plant communities (i.e., meso-habitat) and plant species at local scale. Our findings demonstrate that UAV-VHR data is a valid tool to produce high spatial resolution information in sand beach ecosystems, giving ecology research a new way for responsive, timely, and cost-effective ecosystem monitoring.
The transition towards more resilient and sustainable agricultural systems must start from smallholder farms (SHs), that are responsible for one third of total crop production, are crucial to preserve ecosystems services, but are restive to adopt precision viticulture (PV) tools because benefits are considered insufficient to justify the costs. PV could help SHs to face with climate variability, maintaining high quality standards in the vineyard and to increase grapevine resilience adopting strategic cultural practices. This paper focus on evaluating some canopy management techniques (leaf removal at different phenological stages) on Italian grapevine landraces through field survey and UAV remote sensing, to obtain an automated estimation of the vine status in terms of canopy architecture, vine vigour, and berry traits. Findings showed as the adoption of canopy management practices, like the leaf removal, can increase the productive performance of the vines by regulating canopy growth, improving berry quality, and at the same time can increase the environmental sustainability of viticulture. Remote sensing restores a real-time vegetational indices (VIs) at vine scale that SHs could use to maximize quality and sustainability through a more efficient and site-specific management of the vineyard.
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