Dengue fever represents a great challenge for many countries, and methodologies to prevent and/or control its transmission have been largely discussed by the research community. Modeling is a powerful tool to understand epidemic dynamics and to evaluate costs, benefits and effectiveness of control strategies. In order to assist decision-makers and researchers in the evaluation of different methodologies, we developed DengueME, a collaborative open source platform to simulate dengue disease and its vector's dynamics. DengueME provides a series of compartmental and individual-based models, implemented over a GIS database, that represents the Aedes aegypti's life cycle, human demography, human mobility, urban landscape and dengue transmission. The platform is designed to allow easy simulation of intervention scenarios. A GUI was developed to facilitate model configuration and data input.
Cerrado is the second largest biome in Brazil, covering about 2 million km2. This biome has experienced land use and land cover changes at high rates due to agricultural expansion so that more than 50% of its natural vegetation has already been removed. Therefore, it is crucial to provide technology capable of controlling and monitoring the Cerrado vegetation suppression in order to undertake the environmental conservation policies. Within this context, this work aims to develop a new methodology to detect deforestation in Cerrado through the combination of two Deep Learning (DL) architectures, Long Short-Term Memory (LSTM) and U-Net, and using Landsat and Sentinel image time series. In our proposed method, the LSTM evaluates the time series in relation to the time axis to create a deforestation probability map, which is spatially analyzed by the U-Net algorithm alongside the terrain slope to produce final deforestation maps. The method was applied in two different study areas, which better represent the main deforestation patterns present in Cerrado. The resultant deforestation maps based on cost-free Sentinel-2 images achieved high accuracy metrics, peaking at an overall accuracy of 99.81%±0.21 and F1-Score of 0.8795±0.1180. In addition, the proposed method showed strong potential to automate the PRODES project, which provides the official Cerrado yearly deforestation maps based on visual interpretation.
Deep Learning (DL) methods are currently the state-of-theart in Machine Learning and Pattern Recognition. In recent years, DL has been successfully applied to Remote Sensing (RS) image processing for several tasks, from pre-processing to classification. This paper presents DeepGeo, a toolbox that provides state-of-the-art DL algorithms for RS image classification and analysis. DeepGeo focuses on providing easyto-use and extensible methods, making it easier to those RS analysts without strong programming skills. It is distributed as free and open source package and is available at https: //github.com/rvmaretto/deepgeo.
Abstract. Deep learning-based semantic segmentation models for building delineation face the challenge of producing precise and regular building outlines. Recently, a building delineation method based on frame field learning was proposed by Girard et al. (2020) to extract regular building footprints as vector polygons directly from aerial RGB images. A fully convolution network (FCN) is trained to learn simultaneously the building mask, contours, and frame field followed by a polygonization method. With the direction information of the building contours stored in the frame field, the polygonization algorithm produces regular outlines accurately detecting edges and corners. This paper investigated the contribution of elevation data from the normalized digital surface model (nDSM) to extract accurate and regular building polygons. The 3D information provided by the nDSM overcomes the aerial images’ limitations and contributes to distinguishing the buildings from the background more accurately. Experiments conducted in Enschede, the Netherlands, demonstrate that the nDSM improves building outlines’ accuracy, resulting in better-aligned building polygons and prevents false positives. The investigated deep learning approach (fusing RGB + nDSM) results in a mean intersection over union (IOU) of 0.70 in the urban area. The baseline method (using RGB only) results in an IOU of 0.58 in the same area. A qualitative analysis of the results shows that the investigated model predicts more precise and regular polygons for large and complex structures.
In a social-environmental modeling course, students need to learn complementary skills that include the conceptualisation of a model, different modeling paradigms, computer programming, and the process of rigorously converting ideas and data into a computational program using a given toolkit. Such topics need to be taught in parallel in order to keep a heterogeneous audience motivated. Based on the experience with multidisciplinary audiences, this paper describes a socio-environmental modeling course that explores three modeling paradigms: System dynamics, Cellular automata, and Agent-based modeling. We also present a small tutorial with some examples developed for the course.Em um curso de modelagem socioambiental, os alunos precisam aprender diferentes habilidades complementares que incluem a conceitualização de um modelo, diferentes paradigmas de modelagem, programação de computadores, bem como o processo de converter ideias e dados em um programa computacional usando uma determinada ferramenta de modelagem. Esses temas precisam ser ensinados em paralelo para manter uma audiência heterogênea motivada. Com base na experiência obtida com audiências multidisciplinares, este artigo descreve um curso de modelagem socioambiental que explora três paradigmas: dinâmica de sistemas, autômatos celulares e modelagem baseada em agentes. Apresentamos também um pequeno tutorial com alguns dos exemplos usados no curso.
Deep learning-based models for building delineation from remotely sensed images face the challenge of producing precise and regular building outlines. This study investigates the combination of normalized digital surface models (nDSMs) with aerial images to optimize the extraction of building polygons using the frame field learning method. Results are evaluated at pixel, object, and polygon levels. In addition, an analysis is performed to assess the statistical deviations in the number of vertices of building polygons compared with the reference. The comparison of the number of vertices focuses on finding the output polygons that are the easiest to edit by human analysts in operational applications. It can serve as guidance to reduce the post-processing workload for obtaining high-accuracy building footprints. Experiments conducted in Enschede, the Netherlands, demonstrate that by introducing nDSM, the method could reduce the number of false positives and prevent missing the real buildings on the ground. The positional accuracy and shape similarity was improved, resulting in better-aligned building polygons. The method achieved a mean intersection over union (IoU) of 0.80 with the fused data (RGB + nDSM) against an IoU of 0.57 with the baseline (using RGB only) in the same area. A qualitative analysis of the results shows that the investigated model predicts more precise and regular polygons for large and complex structures.
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