Partially purified Met-tRNAf binding factor, eIF-2, was phosphorylated by using heme-regulated inhibitor (HRI). Phosphorylated eIF-2 was freed from HRI by phosphocellulose column chromatography. Analysis by isoelectric focusing showed 100% phosphorylation of the 38,000-dalton subunit of eIF-2. Both eIF-2 and eIF-2(P) formed ternary complexes with Met-tRNAf and GTP with almost the same efficiency, and in both cases the ternary complex formation was drastically inhibited by prior addition of Mg2+. However, whereas the ternary complexes formed with eIF-2 could be stimulated by Co-eIF-2C at 1 mM Mg2+ and dissociated by Co-eIF-2B at 5 mM Mg2+, the ternary complexes formed with eIF-2(P) were unresponsive to both Co-eIF-2B and Co-eIF-2C. Also under conditions of eIF-2 phosphorylation, HRI drastically inhibited AUG-dependent Met-tRNAf binding to 40S ribosomes.However, HRI (in the presence of ATP) had no effect on the joining of preformed Met-tRNAfr40S-AUG complex to the 60S ribosomal subunit to form Met-tRNAfr80S*AUG complex. These studies suggest that HRI inhibits protein synthesis initiation by phosphorylation of the 38,000-dalton subunit of eIF-2. HRIphosphorylated eIF-2 does not interact with at least two other protein factors, Co-eIF-2B and Co-eIF-2C, and is thus inactive in protein synthesis initiation. During heme deficiency, protein synthesis in reticulocyte lysates is inhibited due to activation of a latent protein synthesis inhibitor, heme-regulated inhibitor (HRI) (7-9). HRI is a protein kinase that specifically phosphorylates the 38,000-dalton subunit of Met-tRNAf binding factor, eIF-2 (10-14). HRI also inhibits the following partial initiation reactions and in each case, the inhibition requires ATP: (i) Co-eIF-2B-promoted dissociation of Met-tRNAf-eIF-2-GTP complex at high Mg2+ and low temperature (0°C) (TDF activity) (3, 15, 16); (fi) CoeIF-2C stimulation of ternary complex formation at 1 mM Mg2+ (5,[16][17][18]; and (iii) Met-tRNAf binding to 40S ribosomes (15,16,19). Based on these results, it has been proposed that HRI phosphorylation causes conformational modification of eIF-2 and that phosphorylated eIF-2 [eIF-2(P)] does not interact with two factors, Co-eIF-2B and Co-eIF-2C, and is inactive in peptide chain intiation. However, these studies do not conclusively establish the precise role of eIF-2(P) in the inhibition process and the possibility that the phosphorylation of other components such as HRI, Co-eIF-2B, and Co-eIF-2C also is involved in this inhibition has not been ruled out. Moreover, Trachsel and Staehelin (20) used prephosphorylated eIF-2 (HRI catalyzed) and observed that both eIF-2(P) and eIF-2 were equally active in all the partial initiation reactions studied including Met-tRNAf binding to 40S ribosomes. Also, the possibility that HRI can inhibit more than one step in peptide chain initiation has been indicated (21).To clearly establish the mechanism of HRI inhibition of peptide chain initiation and the precise role of HRI-phosphorylated eIF-2 in this inhibition process, we prep...