BACKGROUND Nitrogen management of crops, especially when mid‐stage nitrogen is applied, is a key factor affecting the yield and grain quality of rice (Oryza sativa). Here, the timing of mid‐stage nitrogen application was evaluated for its effect on rice grain quality by assessing the morphological structure and physicochemical properties of starch from two japonica rice cultivars growing in fields (Nangeng 9108 and Nangeng 5055). RESULTS The experiment was arranged in a split‐plot design, with the two rice cultivars as the main plot factor and three timings of mid‐stage nitrogen application as the within‐plot factor. Briefly, three applications were made: at the emergence of the top‐sixth‐leaf (ahead), the top‐fourth‐leaf (normal), and the top‐second‐leaf (delayed) of the main stem. Delaying mid‐stage nitrogen application caused the starch granule surface to become uneven and significantly reduced its particle size, whereas it increased the polished rice rate, chalkiness degree, and protein content. Furthermore, the apparent amylose content decreased with a delay in mid‐stage nitrogen application, thereby resulting in higher relative crystallinity, swelling power, water solubility, gelatinization enthalpy, and low retrogradation. Finally, we also found that delaying this nitrogen application lowered the characteristic values of rice flour viscosities, leading to cooking quality deterioration. CONCLUSION These results therefore suggest that delaying mid‐stage nitrogen application enhances the processing and nutritional qualities of japonica rice but evidently has an adverse effect upon its appearance and cooking qualities. © 2020 Society of Chemical Industry

Colorectal cancer (CRC) is a heterogeneous disease that is associated with a gradual accumulation of genetic and epigenetic alterations. Among all CRC stages, stage II tumors are highly heterogeneous with a high relapse rate in about 20–25 % of stage II CRC patients following surgery. Thus, a comprehensive analysis of gene signatures to identify aggressive and metastatic phenotypes in stage II CRC is desired for a more accurate disease classification and outcome prediction. By utilizing a Cancer Array, containing 440 oncogenes and tumor suppressors to profile mRNA expression, we identified a larger number of differentially expressed genes in poorly differentiated stage II colorectal adenocarcinoma tissues, compared to their matched normal tissues. Ontology and Ingenuity Pathway Analysis (IPA) indicated that these genes are involved in functional mechanisms associated with several transcription factors. Genomic alterations of these genes were also investigated through The Cancer Genome Atlas (TCGA) database, utilizing 195 published CRC specimens. The percentage of genomic alterations in these genes was ranked based on their mRNA expression, copy number variations and mutations. This data was further combined with published microarray studies from a large set of CRC tumors classified based on prognostic features. This led to the identification of eight candidate genes including RPN2, HMGB1, AARS, IGFBP3, STAT1, HYOU1, NQO1 and PEA15 that were associated with the progressive phenotype. In particular, RPN2 and HMGB1 displayed a higher genomic alteration frequency in CRC, compared to eight other major solid cancers. Immunohistochemistry was performed on additional 78 stage I–IV CRC samples, where RPN2 protein immunostaining exhibited a significant association with stage III/IV tumors, distant metastasis, and poor differentiation, indicating that RPN2 expression is associated with poor prognosis. Further, our study revealed significant transcriptional regulatory mechanisms, networks and gene signatures, underlying CRC malignant progression and phenotype warranting future clinical investigations.Electronic supplementary materialThe online version of this article (doi:10.1186/s13578-015-0043-9) contains supplementary material, which is available to authorized users.

A mixture of controlled-release nitrogen (N) fertilizers (CRNFs) and conventional urea (CU) as a single application of basal fertilizer could simplify fertilization in rice cultivation from the traditional and more labor-intensive fertilization strategy of multiple applications of nitrogen. However, the reported benefits of this combined approach in increasing rice yield have varied substantially for various reasons, including that various types of rice are characterized by different N requirements to obtain high yield. In this study, two late japonica rice cultivars, Jia58 (J58) and Jia67(J67), were used to determine the best combination of one of two short-acting CRNFs (release periods were 40 and 60 days) and one of three long-acting CRNFs (release periods were 80, 100 and 120 days) to apply with the CU as a one-time application of basal fertilizer. Six combinations of CRNFs were established based on their release periods: A1, 40 + 80 days; A2, 40 + 100 days; A3, 40 + 120 days; B1, 60 + 80 days; B2, 60 + 100 days; and B3, 60 + 120 days. CU applied split at basal, tillering and panicle differentiation stages, respectively as control (CK). The effects of the different treatment combinations of CRNFs on late-rice grain yield, N accumulation and N-use efficiency in a two-year field experiment were determined. Results showed that, the A2 treatment achieved the same yield as that of CK, and yield of the B2 treatment exceeded the yield of CK. Yield of J58 applied with B2 was 7.35% higher in 2018 and 7.40% higher in 2019 than that of the corresponding yield of CK; yield of J67 applied with B2 was 6.05% higher in 2018 and 6.87% higher in 2019 than that of CK. Compared with other CRNF treatments, the release of N from A2 and B2 was most synchronized with nitrogen uptake by the two cultivars, which indicates that fertilizer combination completely met the nitrogen demands during each growth stage of rice. Rice of the A2 and B2 treatments had higher N accumulation, higher aboveground biomass accumulation and LAI (leaf area index) at the heading and maturity stages and higher photosynthetic activity than those of other CRNF treatments. In conclusion, for late japonica rice in China, the application of the A2 and B2 treatments as optimal type of CRNF can achieve labor saving and yield increasing simultaneously in rice production.

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To perform a systemic review and meta-analysis of the diagnostic accuracy of PET (CT) and metaiodobenzylguanidine (MIBG) for diagnosing neuroblastoma (NB), electronic databases were searched as well as relevant references and conference proceedings. The diagnostic accuracy of MIBG and PET (CT) was calculated for NB, primary NB, and relapse/metastasis of NB based on their sensitivity, specificity, and area under the summary receiver operating characteristic curve (AUSROC) in terms of per-lesion and per-patient data. A total of 40 eligible studies comprising 1134 patients with 939 NB lesions were considered for the meta-analysis. For the staging of NB, the per-lesion AUSROC value of MIBG was lower than that of PET (CT) [0.8064±0.0414 vs. 0.9366±0.0166 (P<0.05)]. The per-patient AUSROC value of MIBG and PET (CT) for the diagnosis of NB was 0.8771±0.0230 and 0.6851±0.2111, respectively. The summary sensitivity for MIBG and PET (CT) was 0.79 and 0.89, respectively. The summary specificity for MIBG and PET (CT) was 0.84 and 0.71, respectively. PET (CT) showed higher per-lesion accuracy than MIBG and might be the preferred modality for the staging of NB. On the other hand, MIBG has a comparable diagnosing performance with PET (CT) in per-patient analysis but shows a better specificity.