Summary
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell lineage-specific transcription factors. Here we report that repression of a single RNA binding protein PTB, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby de-repressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in non-neuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
Polydimethylsiloxane
(PDMS) is the predominant material used for
organ-on-a-chip devices and microphysiological systems (MPSs) due
to its ease-of-use, elasticity, optical transparency, and inexpensive
microfabrication. However, the absorption of small hydrophobic molecules
by PDMS and the limited capacity for high-throughput manufacturing
of PDMS-laden devices severely limit the application of these systems
in personalized medicine, drug discovery, in vitro pharmacokinetic/pharmacodynamic (PK/PD) modeling, and the investigation
of cellular responses to drugs. Consequently, the relatively young
field of organ-on-a-chip devices and MPSs is gradually beginning to
make the transition to alternative, nonabsorptive materials for these
crucial applications. This review examines some of the first steps
that have been made in the development of organ-on-a-chip devices
and MPSs composed of such alternative materials, including elastomers,
hydrogels, thermoplastic polymers, and inorganic materials. It also
provides an outlook on where PDMS-alternative devices are trending
and the obstacles that must be overcome in the development of versatile
devices based on alternative materials to PDMS.
SummaryMicroRNA biogenesis is known to be modulated by a variety of RNA binding proteins (RBPs), but in most cases, individual RBPs appear to influence the processing of a small subset of target miRNAs. We herein report that the RNA binding NONO/PSF heterodimer binds a large number of expressed pri-miRNAs in HeLa cells to globally enhance pri-miRNA processing by the Drosha/DGCR8 Microprocessor. Because NONO/PSF are key components of paraspeckles organized by the lncRNA NEAT1, we further demonstrate that NEAT1 also has a profound effect on global pri-miRNA processing. Mechanistic dissection reveals that NEAT1 broadly interacts with NONO/PSF as well as many other RBPs, and that multiple RNA segments in NEAT1, including a “pseudo pri-miRNA” near its 3′ end, help attract the Microprocessor. These findings suggest a bird nest model for a large non-coding RNA to orchestrate efficient processing of almost an entire class of small non-coding RNAs in the nucleus.
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