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The changes in dinoflagellate community structure in both -the water column and sediment in a mesotrophic, tropical port environment were investigated in this study. Since the South West Monsoon (SWM) is the main source of climatic variation, observations were made during two consecutive post-monsoon periods (2001 and 2002) and an intervening pre-monsoon period (2002). The pre-monsoon period supported a more diverse dinoflagellate community in the water column compared to both post-monsoon periods. Heterotrophic dinoflagellates were abundant in the water column as well as sediment. A seasonal cycling between vegetative and resting cysts of autotrophic and heterotrophic dinoflagellates governed by the environmental characteristics of the study area was observed. Temperature, salinity and suspended particulate matter were the main factors affecting dinoflagellate community structure in both the water column and sediment. The dominant dinoflagellates in the water column differed during both post-monsoon periods that followed two dissimilar monsoon events. Prorocentroids and gonyaulacoids dominated the water column subsequent to the 2001 SWM, whereas dinophysoids and unidentified tiny dinoflagellates dominated during the next post-monsoon period. The 2001 SWM started in May, peaked during June-July and reduced gradually to end in October. The 2002 SWM was erratic; it started late (in June) and ended earlier (in September). These observations highlight the potential of the SWM to influence the community structure of dinoflagellates in tropical waters and points to the importance of long-term studies to discern robust variations in dinoflagellate communities in response to fluctuating monsoon regimes.

Interactions between microfouling components influence the biofilm community and the cascading events, thus playing an important role in the biofouling process. Bacteria and diatoms are among the dominant forms reported in biofilms. Experiments were carried out with natural marine biofilms from a tropical monsoon-influenced environment to evaluate the interactions between bacteria and diatoms through application of antibiotics (streptomycin and chloramphenicol). Overall, chloramphenicol inhibited diatom communities, whereas streptomycin did not. These antibiotic-mediated changes in the fouling diatom community were consistent across the seasons. However, the rates at which the fouling communities changed depended on the initial species composition. It was also observed that elevated nutrient concentrations overrode the inhibitory effect of chloramphenicol. Maximum Vibrio enhancement was observed in the enriched conditions during the pre-monsoon and unenriched conditions during the monsoon (with naturally elevated background nutrient concentrations), highlighting the relevance of nutrient concentrations for Vibrio spp. This has interesting implications for antibiotic-mediated interactions between fouling diatom and bacterial communities under differing nutrient regimes. Although this study indicates the relevance of 'cross-talk' at the microfouling level, understanding the effects of additional microbial products (e.g. bacteriocins and peptidoglycan) on these community-level interactions will represent a step forward.

To investigate the effect of bacteria on diatoms at the community level, sediment samples from an intertidal tropical environment were treated with penicillin (a β-lactam antibiotic that can affect diatoms only through bacteria). Streptomycin (an aminoglycoside) and chloramphenicol, antibiotics that can potentially affect protein synthesis in diatom organelles and photosynthesis, were also used for comparison. The changes in diatom community structure and the resistant and tolerant bacterial fractions were analyzed through microscopy, culture techniques and denaturing gradient gel electrophoresis. The reduction in bacterial abundance when treated with penicillin resulted in suppression of Amphora coffeaeformis, a dominant diatom in the study area. The bacterial community preferred the 'tolerance' strategy over 'resistance' in response to treatment with penicillin; these changes in bacterial dynamics were probably linked to concurrent changes in diatom community structure. The observations with penicillin differed from those with streptomycin that did not seem to significantly affect diatoms, and chloramphenicol, which consistently inhibited diatoms. Overall, the results of this study highlight the significance of bacteria in structuring benthic diatom communities and call for the inclusion of the 'antibiotics' approach in studies addressing diatom-bacterial interactions at the community level.