Summary1. The ability to suppress neighbour growth and the ability to withstand growth suppression are widely viewed as two forms of competition, competitive effect and competitive response. 2. We conducted a greenhouse experiment to determine whether these two forms of competition were functionally linked, and to determine which plant traits are associated with effect and response competitive abilities among seedlings of 22 perennial North American prairie species. We further explored the trait-function relationship by growing plants under different soil fertilities and with different neighbour species. 3. To determine competitive abilities, we used a phytometer approach with two phytometer species: Poa pratensis and Achillea millefolium grown in competition with each of the 22 focal species under low and high fertility. Root and shoot morphological traits were measured and principal component analyses were used to reduce the dimensionality of the data. Three axes were extracted, which roughly corresponded to size, root and shoot architecture. 4. The hierarchy of competitive effect ability of the target species did not vary with either soil fertility or neighbour identity, while the hierarchies of competitive response abilities were highly variable among the treatments. Competitive effect ability was closely associated with size-related traits under high nutrient conditions, and with root-related traits under low nutrient conditions. In contrast, few plant traits axes were related to competitive response. 5. These findings indicate significant differences between competitive effect and response ability. We suggest competitive effect ability is a consistent trait of a species, linked to specific plant traits. In contrast, we found little evidence to support the idea that competitive response ability is itself a species trait, and instead it appears this may be simply a collection of different ways of avoiding or tolerating competition and ⁄ or low nutrient conditions. Supporting this argument was a lack of any consistency in which traits were associated with competitive response ability. 6. We recognize the limitations of a single study of seedlings under greenhouse conditions. However, we suggest these findings indicate a need to critically examine current assumptions about plant competition, how it is defined, and the traits which control a species' competitive ability.

tion of fertilization has reached 50 to 60% of the total increase in grain yields in China (Lu and Shi, 1998). A long-term (1982 to 2000) field experiment was conducted at Continued increases in agricultural production would Zhangye, Gansu, China, on a sandy clay loam (Typic Anthrosol) under require increased supply of irrigation water as well as wheat (Triticum aestivum L.)-wheat-corn (Zea mays L.) rotation to fertilizers. However, some studies have shown that condetermine the effects of N, P, and K chemical fertilizers and farmyard manure (M) on grain and straw yield, harvest index (HI), protein

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SummaryFolate metabolism in malaria parasites is a longstanding, clinical target for chemotherapy and prophylaxis. However, despite determination of the complete genome sequence of the lethal species Plasmodium falciparum, the pathway of de novo folate biosynthesis remains incomplete, as no candidate gene for dihydroneopterin aldolase (DHNA) could be identified. This enzyme catalyses the third step in the well-characterized pathway of plants, bacteria, and those eukaryotic microorganisms capable of synthesizing their own folate. Utilizing bioinformatics searches based on both primary and higher protein structures, together with biochemical assays, we demonstrate that P. falciparum cell extracts lack detectable DHNA activity, but that the parasite possesses an unusual orthologue of 6-pyruvoyltetrahydropterin synthase (PTPS), which simultaneously gives rise to two products in comparable amounts, the predominant of which is 6-hydroxymethyl-7,8-dihydropterin, the substrate for the fourth step in folate biosynthesis (catalysed by 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK). This can provide a bypass for the missing DHNA activity and thus a means of completing the biosynthetic pathway from GTP to dihydrofolate. Supported by site-directed mutagenesis experiments, we ascribe the novel catalytic activity of the malarial PTPS to a Cys to Glu change at its active site relative to all previously characterized PTPS molecules, including that of the human host.

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Size-dependent reproductive effort is an important component of plant fitness. The responses of reproductive effort to environmental factors in Amaranthus retroflexus L. were measured in two experiments. A wide range of selection pressures were generated by manipulating the sowing date (29 April, 23 May, 18 June, and 14 July) and planting density (13.4, 36, 121, and 441 plants·m–2). Allometric analysis between reproductive biomass and vegetative biomass across treatments showed that reproductive effort increased with size in response to different planting densities but decreased with size in sowing dates experiment. The allometric exponent between treatments was not influenced by planting densities but had significant variation with sowing date. Total branch length could explain most of the variation of reproductive accumulation and allocation in planting density experiments. For the plants with different sowing dates, total branch length was the main determinant of reproductive biomass, while reproductive effort mainly depended on the number of primary branches per unit stem mass. Architectural constraints with size result in size-dependent reproduction. Size-dependent reproduction in A. retroflexus was influenced by available resources and environmental conditions through the mechanisms of self-regulation of architectural traits.

Application of nitrogen (N) fertilizers, predominantly as urea, is a major source of reactive N in the environment, with wide ranging effects including increased greenhouse gas accumulation in the atmosphere and aquatic eutrophication. The soil microbial community is the principal driver of soil N cycling; thus, improved understanding of microbial community responses to urea addition has widespread implications. We used next-generation amplicon sequencing of the 16S rRNA gene to characterize bacterial and archaeal communities in eight contrasting agricultural soil types amended with 0, 100, or 500 μg N g-1 of urea and incubated for 21 days. We hypothesized that urea amendment would have common, direct effects on the abundance and diversity of members of the microbial community associated with nitrification, across all soils, and would further affect the broader heterotrophic community resulting in decreased diversity and variation in abundances of specific taxa. Significant (P < 0.001) differences in bacterial community diversity and composition were observed by site, but amendment with only the greatest urea concentration significantly decreased Shannon indices. Expansion in the abundances of members of the families Microbacteriaceae, Chitinophagaceae, Comamonadaceae, Xanthomonadaceae, and Nitrosomonadaceae were also consistently observed among all soils (linear discriminant analysis score ≥ 3.0). Analysis of nitrifier genera revealed diverse, soil-specific distributions of oligotypes (strains), but few were correlated with nitrification gene abundances that were reported in a previous study. Our results suggest that the majority of the bacterial and archaeal community are likely unassociated with N cycling, but are significantly negatively impacted by urea application. Furthermore, these results reveal that amendment with high concentrations of urea may reduce nitrifier diversity, favoring specific strains, specifically those within the nitrifying genera Nitrobacter, Nitrospira, and Nitrosospira, that may play significant roles related to N cycling in soils receiving intensive urea inputs.

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