Context Many Australian mammal species are highly susceptible to predation by introduced domestic cats (Felis catus) and European red foxes (Vulpes vulpes). These predators have caused many extinctions and have driven large distributional and population declines for many more species. The serendipitous occurrence of, and deliberate translocations of mammals to, ‘havens’ (cat- and fox-free offshore islands, and mainland fenced exclosures capable of excluding cats and foxes) has helped avoid further extinction. Aims The aim of this study was to conduct a stocktake of current island and fenced havens in Australia and assess the extent of their protection for threatened mammal taxa that are most susceptible to cat and fox predation. Methods Information was collated from diverse sources to document (1) the locations of havens and (2) the occurrence of populations of predator-susceptible threatened mammals (naturally occurring or translocated) in those havens. The list of predator-susceptible taxa (67 taxa, 52 species) was based on consensus opinion from >25 mammal experts. Key results Seventeen fenced and 101 island havens contain 188 populations of 38 predator-susceptible threatened mammal taxa (32 species). Island havens cover a larger cumulative area than fenced havens (2152km2 versus 346km2), and reach larger sizes (largest island 325km2, with another island of 628km2 becoming available from 2018; largest fence: 123km2). Islands and fenced havens contain similar numbers of taxa (27 each), because fenced havens usually contain more taxa per haven. Populations within fences are mostly translocated (43 of 49; 88%). Islands contain translocated populations (30 of 139; 22%); but also protect in situ (109) threatened mammal populations. Conclusions Havens are used increasingly to safeguard threatened predator-susceptible mammals. However, 15 such taxa occur in only one or two havens, and 29 such taxa (43%) are not represented in any havens. The taxon at greatest risk of extinction from predation, and in greatest need of a haven, is the central rock-rat (Zyzomys pedunculatus). Implications Future investment in havens should focus on locations that favour taxa with no (or low) existing haven representation. Although havens can be critical for avoiding extinctions in the short term, they cover a minute proportion of species’ former ranges. Improved options for controlling the impacts of cats and foxes at landscape scales must be developed and implemented.

Context Over the last 230 years, the Australian terrestrial mammal fauna has suffered a very high rate of decline and extinction relative to other continents. Predation by the introduced red fox (Vulpes vulpes) and feral cat (Felis catus) is implicated in many of these extinctions, and in the ongoing decline of many extant species. Aims To assess the degree to which Australian terrestrial non-volant mammal species are susceptible at the population level to predation by the red fox and feral cat, and to allocate each species to a category of predator susceptibility. Methods We collated the available evidence and complemented this with expert opinion to categorise each Australian terrestrial non-volant mammal species (extinct and extant) into one of four classes of population-level susceptibility to introduced predators (i.e. ‘extreme’, ‘high’, ‘low’ or ‘not susceptible’). We then compared predator susceptibility with conservation status, body size and extent of arboreality; and assessed changes in the occurrence of species in different predator-susceptibility categories between 1788 and 2017. Key results Of 246 Australian terrestrial non-volant mammal species (including extinct species), we conclude that 37 species are (or were) extremely predator-susceptible; 52 species are highly predator-susceptible; 112 species are of low susceptibility; and 42 species are not susceptible to predators. Confidence in assigning species to predator-susceptibility categories was strongest for extant threatened mammal species and for extremely predator-susceptible species. Extinct and threatened mammal species are more likely to be predator-susceptible than Least Concern species; arboreal species are less predator-susceptible than ground-dwelling species; and medium-sized species (35 g–3.5kg) are more predator-susceptible than smaller or larger species. Conclusions The effective control of foxes and cats over large areas is likely to assist the population-level recovery of ~63 species – the number of extant species with extreme or high predator susceptibility – which represents ~29% of the extant Australian terrestrial non-volant mammal fauna. Implications Categorisation of predator susceptibility is an important tool for conservation management, because the persistence of species with extreme susceptibility will require intensive management (e.g. predator-proof exclosures or predator-free islands), whereas species of lower predator susceptibility can be managed through effective landscape-level suppression of introduced predators.

Globally, 15,521 animal species are listed as threatened by the International Union for the Conservation of Nature, and of these less than 3% have genomic resources that can inform conservation management. To combat this, global genome initiatives are developing genomic resources, yet production of a reference genome alone does not conserve a species. The reference genome allows us to develop a suite of tools to understand both genome-wide and functional diversity within and between species. Conservation practitioners can use these tools to inform their decision-making. But, at present there is an implementation gap between the release of genome information and the use of genomic data in applied conservation by conservation practitioners. In May 2020, we launched the Threatened Species Initiative and brought a consortium of genome biologists, population biologists, bioinformaticians, population geneticists, and ecologists together with conservation agencies across Australia, including government, zoos, and nongovernment organizations. Our objective is to create a foundation of genomic data to advance our understanding of key Australian threatened species, and ultimately empower conservation practitioners to access and apply genomic data to their decision-making processes through a web-based portal. Currently, we are developing genomic resources for 61 threatened species from a range of taxa, across Australia, with more than 130 collaborators from government, academia, and conservation organizations. Developed in direct consultation with government threatened-species managers and other conservation practitioners, herein we present our framework for meeting their needs and our systematic approach to integrating genomics into threatened species recovery.

Severe category 4 Tropical Cyclone Larry, which crossed north-east Queensland on 20 March 2006, provided a unique opportunity to examine the short-term impacts of a major disturbance event on the population of a highly mobile threatened species, Pteropus conspicillatus. As we had recorded, the species' population distribution in colonial roosts (camps) across the region each month for almost 2 years prior to Cyclone Larry, we continued monthly surveying of P. conspicillatus camp-sites for a year post-cyclone. Here we report on how P. conspicillatus responded and redistributed immediately after the cyclone, and over the subsequent year. Postcyclone, P. conspicillatus typically roosted in smaller camps than pre-cyclone, suggesting that these animals had largely dispersed to locate available blossoms and fruit. For 6 months after Cyclone Larry, up to 90% of the pre-cyclone P. conspicillatus population (ca. 250 000) was unaccounted for across the region. Information provided by the general public assisted us in locating six small camps of P. conspicillatus at 'new' locations, but contributed little to increase our overall population estimate for the species at this time. After November 2006, the number of P. conspicillatus built up at located camp-sites until a post-cyclone peak of 209 000 at the end of the study in March 2007, comparable with the population estimates in March 2005 and 2006. There is no evidence that the cyclone caused significant direct mortality among P. conspicillatus, although there may yet be longer-term and indirect effects on population size. We suggest that redistribution by P. conspicillatus makes sense ecologically in the face of major habitat disturbance and short-to long-term food resource limitation, and is not unlike the response of other Australian mainland Pteropus species to seasonal changes in food availability.

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