Between July 18th and 24th 2010, 26 leading microbial ecology, computation, bioinformatics and statistics researchers came together in Snowbird, Utah (USA) to discuss the challenge of how to best characterize the microbial world using next-generation sequencing technologies. The meeting was entitled “Terabase Metagenomics” and was sponsored by the Institute for Computing in Science (ICiS) summer 2010 workshop program. The aim of the workshop was to explore the fundamental questions relating to microbial ecology that could be addressed using advances in sequencing potential. Technological advances in next-generation sequencing platforms such as the Illumina HiSeq 2000 can generate in excess of 250 billion base pairs of genetic information in 8 days. Thus, the generation of a trillion base pairs of genetic information is becoming a routine matter. The main outcome from this meeting was the birth of a concept and practical approach to exploring microbial life on earth, the Earth Microbiome Project (EMP). Here we briefly describe the highlights of this meeting and provide an overview of the EMP concept and how it can be applied to exploration of the microbiome of each ecosystem on this planet.

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a b s t r a c tAn efficient resource allocation is a fundamental requirement in high performance computing (HPC) systems. Many projects are dedicated to large-scale distributed computing systems that have designed and developed resource allocation mechanisms with a variety of architectures and services. In our study, through analysis, a comprehensive survey for describing resource allocation in various HPCs is reported. The aim of the work is to aggregate under a joint framework, the existing solutions for HPC to provide a thorough analysis and characteristics of the resource management and allocation strategies. Resource allocation mechanisms and strategies play a vital role towards the performance improvement of all the HPCs classifications. Therefore, a comprehensive discussion of widely used resource allocation strategies deployed in HPC environment is required, which is one of the motivations of this survey. Moreover, we have classified the HPC systems into three broad categories, namely: (a) cluster, (b) grid, and (c) aforementioned systems are cataloged into pure software and hybrid/hardware solutions. The system classification is used to identify approaches followed by the implementation of existing resource allocation strategies that are widely presented in the literature.

We present here a report produced by a workshop on 'Addressing failures in exascale computing' held in Park City, Utah, 4-11 August 2012. The charter of this workshop was to establish a common taxonomy about resilience across all the levels in a computing system, discuss existing knowledge on resilience across the various hardware and software layers of an exascale system, and build on those results, examining potential solutions from both a hardware and software perspective and focusing on a combined approach.The workshop brought together participants with expertise in applications, system software, and hardware; they came from industry, government, and academia, and their interests ranged from theory to implementation. The combination allowed broad and comprehensive discussions and led to this document, which summarizes and builds on those discussions.

Two major constraints demand more consideration for energy efficiency in cluster computing: (a) operational costs, and (b) system reliability. Increasing energy efficiency in cluster systems will reduce energy consumption, excess heat, lower operational costs, and improve system reliability. Based on the energy-power relationship, and the fact that energy consumption can be reduced examples. The survey is concluded with a brief discussion and some assumptions about the possible future directions that could be explored to improve the energy efficiency in cluster computing.

Cloud computing has emerged as the leading paradigm for information technology businesses. Cloud computing provides a platform to manage and deliver computing services around the world over the Internet. Cloud services have helped businesses utilize computing services on demand with no upfront investments. The cloud computing paradigm has sustained its growth, which has led to increase in size and number of data centers. Data centers with thousands of computing devices are deployed as back end to provide cloud services. Computing devices are deployed redundantly in data centers to ensure 24/7 availability. However, many studies have pointed out that data centers consume large amount of electricity, thus calling for energy-efficiency measures. In this survey, we discuss research issues related to conflicting requirements of maximizing quality of services (QoSs) (availability, reliability, etc.) delivered by the cloud services while minimizing energy consumption of the data center resources. In this paper, we present the concept of inception of data center energy-efficiency controller that can consolidate data center resources with minimal effect on QoS requirements. We discuss software-and hardware-based techniques and architectures for data center resources such as server, memory, and network devices that can be manipulated by the data center controller to achieve energy efficiency.Index Terms-Controller design, data centers, energy efficiency.

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Abstract-Nowadays Graphic Processing Units (GPU) are gaining increasing popularity in high performance computing (HPC). While modern GPUs can offer much more computational power than CPUs, they also consume much more power. Energy efficiency is one of the most important factors that will affect a broader adoption of GPUs in HPC. In this paper, we systematically characterize the power and energy efficiency of GPU computing. Specifically, using three different applications with various degrees of compute and memory intensiveness, we investigate the correlation between power consumption and different computational patterns under various voltage and frequency levels. Our study revealed that energy saving mechanisms on GPUs behave considerably different than CPUs. The characterization results also suggest possible ways to improve the "greenness" of GPU computing.