The conformational preferences of the diastereomeric neurotransmitters (1R2S) ephedrine and (1S2S) pseudoephedrine have been studied in the gas phase, under free jet-expansion conditions, using ultraviolet spectroscopy (both R2PI and LIF) and infrared ion-dip and hole-burning spectroscopy in combination with ab initio calculation. This has led to the identification and assignment of two conformers in ephedrine and four in pseudoephedrine. Assignments have been made by comparing their experimental infrared and LIF spectra with ab initio vibrational frequencies and ultraviolet rotational band contours. The relative stabilities of the conformers are controlled by a delicate balance between intramolecular hydrogen bonding and dispersive interactions between the methyl groups of the side chain, both with each other and with the aromatic ring. The relative conformational stabilities calculated for ephedrine do not agree with the experimental results; two of its low-lying conformers were detected, but a third, lying at an intermediate energy, was not. The possibility of its collisional relaxation into the global minimum during the supersonic expansion was not supported by the ab initio calculations, which predict a substantial barrier along the minimum energy pathway. It is possible that the combination of a relatively weak transition moment and a lack of facile pathways for relaxation from higher lying structures into the “missing” conformer may play a role.
Partially resolved ultraviolet rotational band contours associated with the S 1 r S 0 origin bands of the six most populated conformers of jet-cooled phenylalanine have been recorded via resonant two-photon ionization. The strong dependence of their transition moment orientation on the conformation of the alanyl side chain has facilitated their structural assignment through simulations based upon ab initio computation. The S 1 lifetimes of all six conformers, measured through pump-probe delayed ionization, reveal an efficient nonradiative decay pathway in the most stable conformer, which is stabilized through a chain of intramolecular hydrogen bonds linking the side chain to the benzene ring.
The issue of the influence of the side chain/backbone interaction on the local conformational preferences of a phenylalanine residue in a peptide chain is addressed. A synergetic approach is used, which combines gas-phase UV spectroscopy as well as gas-phase IR/UV double-resonance experiments with DFT and post Hartree-Fock calculations. N-Acetyl-Phe-amide was chosen as a model system for which three different conformers were observed. The most stable conformer has been identified as an extended L conformation of the peptide backbone. It is stabilized by a weak but significant NH-π interaction bridging the aromatic ring on the residue (i) with the NH group on residue (i+1), with the aromatic side chain being in an anti conformation. This stable conformation corresponds to the common NH(i+1)-aromatic(i) interaction encountered in proteins for the three aromatic residues (phenylalanine, tyrosine, and tryptophan), which illustrates the relevance of gas-phase investigations to structural biology issues. The two other less abundant conformers have been assigned to two γ-folded backbone conformations that differ by the orientation of the side chain. In all cases, the IR data provided spectroscopic fingerprints of these interactions. Finally, the strong conformational dependence of the fluorescence yield found for N-acetyl-Phe-amide illustrates the role of the environment on the excited-state dynamics of these species, which is often exploited by biochemists to monitor protein structural changes from tryptophan lifetime measurements.
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