Biological invasions drive environmental change, potentially threatening native biodiversity, human health, and global economies. Population genomics is an increasingly popular tool in invasion biology, improving accuracy and providing new insights into the genetic factors that underpin invasion success compared to research based on a small number of genetic loci. We examine the extent to which population genomic resources, including reference genomes, have been used or are available for invasive species research. We find that 82% of species on the International Union for Conservation of Nature “100 Worst Invasive Alien Species” list have been studied using some form of population genetic data, but just 32% of these species have been studied using population genomic data. Further, 55% of the list’s species lack a reference genome. With incursion rates escalating globally, understanding how genome-driven processes facilitate invasion is critical, but despite a promising trend of increasing uptake, “invasion genomics” is still in its infancy. We discuss how population genomic data can enhance our understanding of biological invasion and inform proactive detection and management of invasive species, and we call for more research that specifically targets this area.
Climate change is expected to impact the global distribution and diversity of arthropods, with warmer temperatures forcing species to relocate, acclimate, adapt, or go extinct. The Arctic and Antarctic regions are extremely sensitive to climate change and have displayed profound and variable changes over recent decades, including decreases in sea ice extent, greening of tundra, and changes to hydrological and biogeochemical cycles. It is unclear how polar-adapted arthropods will respond to such changes, though many are expected to be at great risk of extinction. Here, we review the adaptive mechanisms that allow polar arthropods to persist in extreme environments and discuss how the effects of climate change at the poles will likely favour non-native species or those with the ability to rapidly evolve and/or acclimate. We find that physiological, behavioural, plastic, and genetic data are limited in scope for polar arthropods and research on adaptive responses to change is scarce. This restricts our ability to predict how they may respond to a warming climate. We call for a greater investment in research that specifically targets the ecology and evolution of these taxa, including genomic and transcriptomic approaches that can evaluate the potential for plastic and evolved environmental responses.
The pink bollworm (Pectinophora gossypiella) is one of the world’s most destructive pests of cotton. This invasive lepidopteran occurs in nearly all cotton-growing countries. Its presence in the Ord Valley of North West Australia poses a potential threat to the expanding cotton industry there. To assess this threat and better understand population structure of pink bollworm, we analysed genomic data from individuals collected in the field from North West Australia, India, and Pakistan, as well as from four laboratory colonies that originated in the United States. We identified single nucleotide polymorphisms (SNPs) using a reduced-representation, genotyping-by-sequencing technique (DArTseq). The final filtered dataset included 6355 SNPs and 88 individual genomes that clustered into five groups: Australia, India-Pakistan, and three groups from the United States. We also analysed sequences from Genbank for mitochondrial DNA (mtDNA) locus cytochrome c oxidase I (COI) for pink bollworm from six countries. We found low genetic diversity within populations and high differentiation between populations from different continents. The high genetic differentiation between Australia and the other populations and colonies sampled in this study reduces concerns about gene flow to North West Australia, particularly from populations in India and Pakistan that have evolved resistance to transgenic insecticidal cotton. We attribute the observed population structure to pink bollworm’s narrow host plant range and limited dispersal between continents.
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