Community mitigation strategies to combat COVID-19, ranging from healthy hygiene to shelter-in-place orders, exact substantial socioeconomic costs. Judicious implementation and relaxation of restrictions amplify their public health benefits while reducing costs. We derive optimal strategies for toggling between mitigation stages using daily COVID-19 hospital admissions. With public compliance, the policy triggers ensure adequate intensive care unit capacity with high probability while minimizing the duration of strict mitigation measures. In comparison, we show that other sensible COVID-19 staging policies, including France’s ICU-based thresholds and a widely adopted indicator for reopening schools and businesses, require overly restrictive measures or trigger strict stages too late to avert catastrophic surges. As proof-of-concept, we describe the optimization and maintenance of the staged alert system that has guided COVID-19 policy in a large US city (Austin, Texas) since May 2020. As cities worldwide face future pandemic waves, our findings provide a robust strategy for tracking COVID-19 hospital admissions as an early indicator of hospital surges and enacting staged measures to ensure integrity of the health system, safety of the health workforce, and public confidence.
Community mitigation strategies to combat COVID-19, ranging from healthy hygiene to shelter-in-place orders, exact substantial socioeconomic costs. Judicious implementation and relaxation of restrictions amplify their public health benefits while reducing costs. We derive optimal strategies for toggling between mitigation stages using daily COVID-19 hospital admissions. With public compliance, the policy triggers ensure adequate intensive care unit capacity with high probability while minimizing the duration of strict mitigation measures. In comparison, we show that other sensible COVID-19 staging policies, including France’s ICU-based thresholds and a widely adopted indicator for reopening schools and businesses, require overly restrictive measures or trigger strict stages too late to avert catastrophic surges. As cities worldwide face future pandemic waves, our findings provide a robust strategy for tracking COVID-19 hospital admissions as an early indicator of hospital surges and enacting staged measures to ensure integrity of the health system, safety of the health workforce, and public confidence.
The proliferation of data collection technologies often results in large data sets with many observations and many variables. In practice, highly relevant engineered features are often groups of predictors that share a common regression coefficient (i.e., the predictors in the group affect the response only via their collective sum), where the groups are unknown in advance and must be discovered from the data. We propose an algorithm called coefficient tree regression (CTR) to discover the group structure and fit the resulting regression model. In this regard CTR is an automated way of engineering new features, each of which is the collective sum of the predictors within each group. The algorithm can be used when the number of variables is larger than, or smaller than, the number of observations. Creating new features that affect the response in a similar manner improves predictive modeling, especially in domains where the relationships between predictors are not known a priori. CTR borrows computational strategies from both linear regression (fast model updating when adding/modifying a feature in the model) and regression trees (fast partitioning to form and split groups) to achieve outstanding computational and predictive performance. Finding features that represent hidden groups of predictors (i.e., a hidden ontology) that impact the response only via their sum also has major interpretability advantages, which we demonstrate with a real data example of predicting political affiliations with television viewing habits. In numerical comparisons over a variety of examples, we demonstrate that both computational expense and predictive performance are far superior to existing methods that create features as groups of predictors. Moreover, CTR has overall predictive performance that is comparable to or slightly better than the regular lasso method, which we include as a reference benchmark for comparison even though it is non-group-based, in addition to having substantial computational and interpretive advantages over lasso.
Calibration of parameters in simulation models is necessary to develop sharp predictions with quantified uncertainty. A scalable method for calibration involves building an emulator after conducting an experiment on the simulation model. However, when the parameter space is large, meaning the parameters are quite uncertain prior to calibration, much of the parameter space can produce unstable or unrealistic simulator responses that drastically differ from the observed data. One solution to this problem is to simply discard, or filter out, the parameters that gave unreasonable responses and then build an emulator only on the remaining simulator responses. In this article, we demonstrate the key mechanics for an approach that emulates filtered responses but also avoids unstable and incorrect inference. These ideas are illustrated on a real data example of calibrating COVID-19 epidemiological simulation model.
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