Many-body
Green’s functions theory within the GW approximation
and the Bethe-Salpeter Equation (BSE) is implemented
in the open-source VOTCA-XTP software, aiming at the calculation of
electronically excited states in complex molecular environments. Based
on Gaussian-type atomic orbitals and making use of resolution of identity
techniques, the code is designed specifically for nonperiodic systems.
Application to a small molecule reference set successfully validates
the methodology and its implementation for a variety of excitation
types covering an energy range from 2 to 8 eV in single molecules.
Further, embedding each GW-BSE calculation into an
atomistically resolved surrounding, typically obtained from Molecular
Dynamics, accounts for effects originating from local fields and polarization.
Using aqueous DNA as a prototypical system, different levels of electrostatic
coupling between the regions in this GW-BSE/MM setup
are demonstrated. Particular attention is paid to charge-transfer
(CT) excitations in adenine base pairs. It is found that their energy
is extremely sensitive to the specific environment and to polarization
effects. The calculated redshift of the CT excitation energy compared
to a nucelobase dimer treated in vacuum is of the order of 1 eV, which
matches expectations from experimental data. Predicted lowest CT energies
are below that of a single nucleobase excitation, indicating the possibility
of an initial (fast) decay of such an UV excited state into a binucleobase
CT exciton. The results show that VOTCA-XTP’s GW-BSE/MM is a powerful tool to study a wide range of types of electronic
excitations in complex molecular environments.
We present the open-source VOTCA-XTP software for the calculation of the excited-state electronic structure of molecules using many-body Green's functions theory in the GW approximation with the Bethe-Salpeter Equation (BSE). This work provides a summary of the underlying theory and discusses details of its implementation based on Gaussian orbitals, including, i.a., resolution-of-identity techniques, different approaches to the frequency integration of the self-energy or acceleration by offloading compute-intensive matrix operations using GPUs in a hybrid OpenMP/Cuda scheme. A distinctive feature of VOTCA-XTP is the capability to couple the calculation of electronic excitations to a classical polarizable environment on atomistic level in a coupled quantum-and molecular-mechanics (QM/MM) scheme, where a complex morphology can be imported from Molecular Dynamics simulations. The capabilities and limitations of the GW -BSE implementation are illustrated with two examples. First, we study the dependence of optically active electron-hole excitations in a series of diketopyrrolopyrrole-based oligomers on molecular-architecture modifications and the number of repeat units. Second, we use the GW -BSE/MM setup to investigate the effect of polarization on localized and intermolecular charge-transfer excited states in morphologies of low-donor content rubrenefullerene mixtures. These showcases demonstrate that our implementation currently allows to treat systems with up to 2500 basis functions on regular shared-memory workstations, providing accurate descriptions of quasiparticle and coupled electron-hole excited states of various character on an equal footing.
We
present a general framework for the construction of a deep feedforward
neural network (FFNN) to predict distance and orientation dependent
electronic coupling elements in disordered molecular materials. An
evolutionary algorithm automatizes the selection of an optimal architecture
of the artificial neural network within a predefined search space.
Systematic guidance, beyond minimizing the model error with stochastic
gradient descent based backpropagation, is provided by simultaneous
maximization of a model fitness that takes into account additional
physical properties, such as the field-dependent carrier mobility.
As a prototypical system, we consider hole transport in amorphous
tris(8-hydroxyquinolinato)aluminum. Reference data for training and
validation is obtained from multiscale ab initio simulations, in which
coupling elements are evaluated using density-functional theory, for
a system containing 4096 molecules. The Coulomb matrix representation
is chosen to encode the explicit molecular pair coordinates into a
rotation and translation invariant feature set for the FFNN. The final
optimized deep feedforward neural network is tested for transport
models without and with energetic disorder. It predicts electronic
coupling elements and mobilities in excellent agreement with the reference
data. Such a FFNN is readily applicable to much larger systems at
negligible computational cost, providing a powerful surrogate model
to overcome the size limitations of the ab initio approach.
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