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Abstract. This study focuses on an improved representation of the biological soft tissue pump in the global threedimensional biogeochemical ocean model PISCES. We compare three parameterizations of particle dynamics: (1) the model standard version including two particle size classes, aggregation-disaggregation and prescribed sinking speed; (2) an aggregation-disaggregation model with a particle size spectrum and prognostic sinking speed; (3) a mineral ballast parameterization with no size classes, but prognostic sinking speed. In addition, the model includes a description of surface sediments and organic carbon early diagenesis. Model output is compared to data or data based estimates of ocean productivity, pe-ratios, particle fluxes, surface sediment bulk composition and benthic O 2 fluxes. Model results suggest that different processes control POC fluxes at different depths. In the wind mixed layer turbulent particle coagulation appears as key process in controlling pe-ratios. Parameterization (2) yields simulated pe-ratios that compare well to observations. Below the wind mixed layer, POC fluxes are most sensitive to the intensity of zooplankton flux feeding, indicating the importance of zooplankton community composition. All model parameters being kept constant, the capability of the model to reproduce yearly mean POC fluxes below 2000 m and benthic oxygen demand does at first order not dependent on the resolution of the particle size spectrum. Aggregate formation appears essential to initiate an intense biological pump. At great depth the reported close to constant particle fluxes are most likely the result of the combined effect of aggregate formation and mineral ballasting.

In the Southern Ocean, high accumulation rates of opal--which forms by precipitation from silica-bearing solutions--have been found in the sediment in spite of low production rates of biogenic silica and carbon in the overlying surface waters. This so-called 'opal paradox' is generally attributed to a higher efficiency of opal preservation in the Southern Ocean than elsewhere. Here we report biogenic silica production rates, opal rain rates in the water column and opal sediment burial rates for the Indian Ocean sector of the Southern Ocean, which show that the assumed opal paradox is a result of underestimated opal production rates and overestimated opal accumulation rates. Our data thus demonstrate that the overall preservation efficiency of biogenic opal in this region is substantially lower than previously thought, and that it lies within a factor of two of the global mean. The comparison of our revised opal preservation efficiencies for the Southern Ocean with existing values from the equatorial Pacific Ocean and the North Atlantic Ocean shows that spatial differences in preservation efficiencies are not the primary reason for the differences in sedimentary opal accumulation. The reconciliation of surface production rates and sedimentary accumulation rates may enable the use of biogenic opal in the reconstruction of palaeo-productivity when the factors that affect the Si/C ratio are better understood.