The quick-EXAFS (QEXAFS) method adds time resolution to X-ray absorption spectroscopy (XAS) and allows dynamic structural changes to be followed. A completely new QEXAFS setup consisting of monochromator, detectors and data acquisition system is presented, as installed at the SuperXAS bending-magnet beamline at the Swiss Light Source (Paul Scherrer Institute, Switzerland). The monochromator uses Si(111) and Si(311) channel-cut crystals mounted on one crystal stage, and remote exchange allows an energy range from 4.0 keV to 32 keV to be covered. The spectral scan range can be electronically adjusted up to several keV to cover multiple absorption edges in one scan. The determination of the Bragg angle close to the position of the crystals allows high-accuracy measurements. Absorption spectra can be acquired with fast gridded ionization chambers at oscillation frequencies of up to 50 Hz resulting in a time resolution of 10 ms, using both scan directions of each oscillation period. The carefully developed low-noise detector system yields high-quality absorption data. The unique setup allows both state-of-the-art QEXAFS and stable step-scan operation without the need to exchange whole monochromators. The long-term stability of the Bragg angle was investigated and absorption spectra of reference materials as well as of a fast chemical reaction demonstrate the overall capabilities of the new setup.
SUMMARYFlowering is an important agronomic trait that often depends on the integration of photoperiod, vernalization, gibberellin and/or autonomous signaling pathways by regulatory proteins such as FLOWERING LOCUS T (FT), a member of the phosphatidylethanolamine-binding protein (PEBP) family. Six PEBP family proteins control flowering in the model plant Arabidopsis thaliana, and their regulatory functions are well established, but variation in the number and structural diversity of PEBPs in different species means their precise functions must be determined on a case-by-case basis. We isolated four novel FT-like genes from Nicotiana tabacum (tobacco), and determined their expression profiles in wild-type plants and their overexpression phenotypes in transgenic plants. We found that all four genes were expressed in leaves under short-day conditions, and at least NtFT3 expression was restricted to phloem companion cells. We also found that the NtFT1, NtFT2 and NtFT3 proteins are floral inhibitors (atypical for FT-like proteins), whereas only NtFT4 is a floral inducer. We were unable to detect the expression of these genes under long-day conditions, suggesting that all four tobacco FT-like proteins may control flowering in response to short days. Phylogenetic analysis of PEBP family proteins and their functions in different solanaceous species confirmed that gene duplication and divergence within the FT-like clade has led to the evolution of antagonistic regulators that may help to fine-tune floral initiation in response to environmental cues.
The structure of iron and copper sites during the selective catalytic reduction (SCR) of NO x by NH 3 and related reactions (NH 3 adsorption/oxidation, NO oxidation) has been elucidated by spatially-and time-resolved X-ray absorption spectroscopy (XAS) along the catalyst bed over Fe-containing BEA and ZSM-5 zeolites as well as Cu-SAPO-34 silicoaluminophosphate. Strong gradients of the Fe and Cu oxidation state are present along the catalyst bed for the processes involving NH 3 and NO x (SCR) and less pronounced for NH 3 oxidation, whereas the catalyst state in the NO x containing feed resembles that of a catalyst exposed to air. The variation in the oxidation state is strongly correlated to the concentration of NH 3 and is more pronounced in the presence of NO x . For temperatures higher than 250°C the Fe and Cu sites at the beginning of the catalyst bed stay in partially reduced state, whereas they are more oxidized in the later zones where NH 3 and NO concentrations decrease. For temperatures lower than 250°C a reverse effect is seen for Fe-zeolites where the beginning of the catalyst bed contained more oxidized iron species than at the end of the catalyst bed. This is attributed to NH 3 inhibition. The obtained data allow to conclude that both NH 3 and NO x are involved in a reaction over the corresponding transition metal site, and its reoxidation is a rate-limiting step of the NH 3 -SCR for these catalysts.
As the global climate changes, the higher latitudes are seen to be warming significantly faster. It is likely that the Arctic biome will experience considerable shifts in ice melt season length, leading to changes in photoirradiance and in the freshwater inputs to the marine environment. The exchange of nutrients between Arctic surface and deep waters and their cycling throughout the water column is driven by seasonal change. The impacts, however, of the current global climate transition period on the biodiversity of the Arctic Ocean and its activity are not yet known. To determine seasonal variation in the microbial communities in the deep water column, samples were collected from a profile (1-1000 m depth) in the waters around the Svalbard archipelago throughout an annual cycle encompassing both the polar night and day. High-throughput sequencing of 16S rRNA gene amplicons was used to monitor prokaryote diversity. In epipelagic surface waters (<200 m depth), seasonal diversity varied significantly, with light and the corresponding annual phytoplankton bloom pattern being the primary drivers of change during the late spring and summer months. In the permanently dark mesopelagic ocean depths (>200 m), seasonality subsequently had much less effect on community composition. In summer, phytoplankton-associated Gammaproteobacteria and Flavobacteriia dominated surface waters, whilst in low light conditions (surface waters in winter months and deeper waters all year round), the Thaumarchaeota and Chloroflexi-type SAR202 predominated. Alpha-diversity generally increased in epipelagic waters as seasonal light availability decreased; OTU richness also consistently increased down through the water column, with the deepest darkest waters containing the greatest diversity. Beta-diversity analyses confirmed that seasonality and depth also primarily drove community composition. The relative abundance of the eleven predominant taxa showed significant changes in surface waters in summer months and varied with season depending on the phytoplankton bloom stage; corresponding populations in deeper waters however, remained relatively unchanged. Given the significance of the annual phytoplankton bloom pattern on prokaryote diversity in Arctic waters, any changes to bloom dynamics resulting from accelerated global warming will likely have major impacts on surface marine microbial communities, those impacts inevitably trickling down into deeper waters.
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