We present the first public version (v0.2) of the open-source and community-developed Python package, Astropy. This package provides core astronomy-related functionality to the community, including support for domain-specific file formats such as flexible image transport system (FITS) files, Virtual Observatory (VO) tables, and common ASCII table formats, unit and physical quantity conversions, physical constants specific to astronomy, celestial coordinate and time transformations, world coordinate system (WCS) support, generalized containers for representing gridded as well as tabular data, and a framework for cosmological transformations and conversions. Significant functionality is under active development, such as a model fitting framework, VO client and server tools, and aperture and point spread function (PSF) photometry tools. The core development team is actively making additions and enhancements to the current code base, and we encourage anyone interested to participate in the development of future Astropy versions.

We investigate the column density distribution function of neutral hydrogen at redshift z = 3 using a cosmological simulation of galaxy formation from the OverWhelmingly Large Simulations (OWLS) project. The base simulation includes gravity, hydrodynamics, star formation, supernovae feedback, stellar winds, chemodynamics, and element-by-element cooling in the presence of a uniform UV background. Self-shielding and formation of molecular hydrogen are treated in post-processing, without introducing any free parameters, using an accurate reverse ray-tracing algorithm and an empirical relation between gas pressure and molecular mass fraction. The simulation reproduces the observed z = 3 abundance of Ly-α forest, Lyman Limit, and Damped Ly-α Hi absorption systems probed by quasar sight lines over ten orders of magnitude in column density. Self-shielding flattens the column density distribution for N HI > 10 18 cm −2 , while the transition to fully neutral gas and conversion of Hi to H 2 steepen it around column densities of N HI = 10 20.3 cm −2 and N HI = 10 21.5 cm −2 , respectively.

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Additional information: Use policyThe full-text may be used and/or reproduced, and given to third parties in any format or medium, without prior permission or charge, for personal research or study, educational, or not-for-pro t purposes provided that:• a full bibliographic reference is made to the original source • a link is made to the metadata record in DRO • the full-text is not changed in any way The full-text must not be sold in any format or medium without the formal permission of the copyright holders.Please consult the full DRO policy for further details.