We surveyed endophytic fungal communities in leaves of a single tree species ( Metrosideros polymorpha ) across wide environmental gradients (500–5,500 mm of rain/y; 10–22 °C mean annual temperature) spanning short geographic distances on Mauna Loa Volcano, Hawai’i. Using barcoded amplicon pyrosequencing at 13 sites (10 trees/site; 10 leaves/tree), we found very high levels of diversity within sites (a mean of 551 ± 134 taxonomic units per site). However, among-site diversity contributed even more than did within-site diversity to the overall richness of more than 4,200 taxonomic units observed in M. polymorpha , and this among-site variation in endophyte community composition correlated strongly with temperature and rainfall. These results are consistent with suggestions that foliar endophytic fungi are hyperdiverse. They further suggest that microbial diversity may be even greater than has been assumed and that broad-scale environmental controls such as temperature and rainfall can structure eukaryotic microbial diversity. Appropriately constrained study systems across strong environmental gradients present a useful means to understand the environmental factors that structure the diversity of microbial communities.

Abstract. The field of ecology is poised to take advantage of emerging technologies that facilitate the gathering, analyzing, and sharing of data, methods, and results. The concept of transparency at all stages of the research process, coupled with free and open access to data, code, and papers, constitutes ''open science.'' Despite the many benefits of an open approach to science, a number of barriers to entry exist that may prevent researchers from embracing openness in their own work. Here we describe several key shifts in mindset that underpin the transition to more open science. These shifts in mindset include thinking about data stewardship rather than data ownership, embracing transparency throughout the data life-cycle and project duration, and accepting critique in public. Though foreign and perhaps frightening at first, these changes in thinking stand to benefit the field of ecology by fostering collegiality and broadening access to data and findings. We present an overview of tools and best practices that can enable these shifts in mindset at each stage of the research process, including tools to support data management planning and reproducible analyses, strategies for soliciting constructive feedback throughout the research process, and methods of broadening access to final research products.

Terrestrial LiDAR (light detection and ranging) technologies have created new means of quantifying forest canopy structure, allowing not only the estimation of biomass, but also descriptions of the position and variability in canopy elements in space. Such measures provide novel structural information broadly useful to ecologists. There is a growing need for both a detailed taxonomy of forest canopy structural complexity (CSC) and open, transparent, and flexible tools to quantify complexity in ways that will advance foundational ecological knowledge of structure‐function relationships. The CSC taxonomy we present groups structural descriptors into five categories: leaf area and density, canopy height, canopy arrangement, canopy openness, and canopy variability. This paper also introduces the r package forestr, the first open‐source r package for the calculation of CSC metrics from terrestrial LiDAR data. The r package forestr is an analysis toolbox that works with portable canopy LiDAR (PCL) data and other pixelated/voxelized point clouds derived from terrestrial LiDAR scanning (TLS) data to calculate CSC metrics of interest to ecologists, modellers, forest managers, and remote sensing scientists.

• Endophytes illuminate Xylariaceae circumscription and phylogenetic structure.• Endophytes occur in lineages previously not known for endophytism.• Boreal and temperate lichens and non-flowering plants commonly host Xylariaceae.• Many have endophytic and saprotrophic life stages and are widespread generalists.*Highlights (for review)

, A. E. (2019). Host availability drives distributions of fungal endophytes in the imperilled boreal realm. Nature ecology & evolution, 1-8.

The majority of Hawaii's lowland wet forests no longer exist, with many of the last remaining patches found on the eastern, windward sides of the largest islands. To better understand successional patterns and invasion in these native systems, we quantified basal area (BA) and densities of woody species and understory cover at nine sites in the Puna district on the Island of Hawai‘i, representing age gradients of native stand development on both ‘a’ā and pāhoehoe lava flows. On both flow types, BA of native species increased (from 5 to 50 m2/ha) and stem densities decreased (from 3700 to 2600 stems/ha) with increasing stand/flow age. Both native and introduced species compositions diverged between substrate types on older flows. We found that lowland wet native forests remain at least partially intact in several locations, but their functional and compositional integrity is increasingly compromised by invasion of nonnative species, such as Psidium cattleianum and Melastoma candidum, which become more common at sites greater than 300‐yr old. This time period may represent a threshold, after which abiotic environmental conditions no longer constrain recruitment of introduced species. On older flows, nonnative stem densities swamped those of native species by an order of magnitude, with nonnative stems (height > 1.3 m) achieving densities as high as 18,000 stems/ha. In addition, all stands lacked recruitment of native woody species in the understory, suggesting that without management, the native componentsof these forests may soon no longer be self‐sustaining.

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Aim The differential responses of plant species to climate change are of great interest and grave concern for scientists and conservationists. One underexploited resource for better understanding these changes are the records held by herbaria. Using these records to assess the responses of different groups of species across the entire flora of California, we sought to quantify the magnitude of species elevational shifts, to measure differences in shifts among functional groups and between native and introduced species, and to evaluate whether these shifts were related to the conservation of thermal niches. Location California.Methods To characterize these shifts in California, we used 681,609 georeferenced herbarium records to estimate mean shifts in elevational and climatic space of 4426 plant taxa. We developed and employed a statistical method to robustly analyse the data represented in these records. ResultsWe found that 15% of all taxa in California have ranges that have shifted upward over the past century. There are significant differences between range shifts of taxa with different naturalization statuses: 12% of endemic taxa show significant upward range shifts, while a greater proportion (27%) of introduced taxa have shifted upward. We found significant differences between the proportion of significant range shifts across taxa with different seed sizes, but did not find evidence for differences in shift based on life-form (annual versus perennial, herbaceous versus woody).Main conclusions Our analyses suggest that introduced species have disproportionately expanded their ranges upward in elevation over the past century when compared with native species. While these shifts in introduced species may not be exclusively driven by climate, they highlight the importance of considering the interacting factors of climate-driven range shifts and invasion to understand how floras are responding in the face of anthropogenic change.