Fibropapillomatosis (FP) is a marine turtle disease recognised by benign tumours on the skin, eyes, shell, oral cavity and/or viscera. Despite being a globally distributed disease that affects an endangered species, research on FP and its likely causative agent chelonid alphaherpesvirus 5 (ChHV5) in Australia is limited. Here we present improved molecular assays developed for detection of ChHV5, in combination with a robust molecular and phylogenetic analysis of ChHV5 variants. This approach utilised a multi-gene assay to detect ChHV5 in all FP tumors sampled from 62 marine turtles found at six foraging grounds along the Great Barrier Reef. Six distinct variants of ChHV5 were identified and the distribution of these variants was associated with host foraging ground. Conversely, no association between host genetic origin and ChHV5 viral variant was found. Together this evidence supports the hypothesis that marine turtles undergo horizontal transmission of ChHV5 at foraging grounds and are unlikely to be contracting the disease at rookeries, either during mating or vertically from parent to offspring.

Ranaviruses infect and have been associated with mass mortality events in fish, amphibians and reptiles and are capable of interclass transmission. Eastern water dragons (EWDs), a semi-aquatic squamate, have an overlapping distribution with several species shown to be susceptible to Bohle iridovirus (BIV). However, this species has not been previously investigated, and no known mass mortalities have occurred in wild populations. Here we report the experimental infection of juvenile EWDs with BIV to investigate a water-dwelling lizards' susceptibility to a ranaviral strain present in northern Queensland, Australia. Lizards were exposed via oral inoculation, intramuscular injection, or cohabitation with orally infected lizards. All exposure methods were effective in establishing an infection as demonstrated by skin lesions and pathological changes in the internal organs. Necrosis, haemorrhage and inflammation were observed histologically in the pancreas, liver, spleen, kidney and submucosa of the gastrointestinal tract of BIV-exposed lizards. Variably sized basophilic intracytoplasmic inclusion bodies were observed in the liver of 6/14 BIV-exposed lizards. Virus was isolated from the liver and kidney of all BIV-infected lizards and confirmed with quantitative PCR (qPCR). The outcome of this study demonstrates that juvenile EWDs are susceptible to BIV, thereby adding Australian lizards to the broad host range of ranaviruses. Furthermore, this study provides additional evidence of BIV's ability to infect different classes of ecothermic vertebrates.

The impact of a range of different threats has resulted in the listing of six out of seven sea turtle species on the IUCN Red List of endangered species. Disease risk analysis (DRA) tools are designed to provide objective, repeatable and documented assessment of the disease risks for a population and measures to reduce these risks through management options. To the best of our knowledge, DRAs have not previously been published for sea turtles, although disease is reported to contribute to sea turtle population decline. Here, a comprehensive list of health hazards is provided for all seven species of sea turtles. The possible risk these hazards pose to the health of sea turtles were assessed and “One Health” aspects of interacting with sea turtles were also investigated. The risk assessment was undertaken in collaboration with more than 30 experts in the field including veterinarians, microbiologists, social scientists, epidemiologists and stakeholders, in the form of two international workshops and one local workshop. The general finding of the DRA was the distinct lack of knowledge regarding a link between the presence of pathogens and diseases manifestation in sea turtles. A higher rate of disease in immunocompromised individuals was repeatedly reported and a possible link between immunosuppression and environmental contaminants as a result of anthropogenic influences was suggested. Society based conservation initiatives and as a result the cultural and social aspect of interacting with sea turtles appeared to need more attention and research. A risk management workshop was carried out to acquire the insights of local policy makers about management options for the risks relevant to Queensland and the options were evaluated considering their feasibility and effectiveness. The sea turtle DRA presented here, is a structured guide for future risk assessments to be used in specific scenarios such as translocation and head-starting programs.

Elusive aquatic wildlife, such as endangered sea turtles, are difficult to monitor and conserve. As novel molecular and genetic technologies develop, it is possible to adapt and optimize them for wildlife conservation. One such technology is environmental (e)DNA -the detection of DNA shed from organisms into their surrounding environments. We developed species-specific green (Chelonia mydas) and loggerhead (Caretta caretta) sea turtle probe-based qPCR assays, which can detect and quantify sea turtle eDNA in controlled (captive tank water and sand samples) and free ranging (oceanic water samples and nesting beach sand) settings. eDNA detection complemented traditional in-water sea turtle monitoring by enabling detection even when turtles were not visually observed. Furthermore, we report that high throughput shotgun sequencing of eDNA sand samples enabled sea turtle population genetic studies and pathogen monitoring, demonstrating that noninvasive eDNA techniques are viable and efficient

Intensive worldwide efforts are underway to determine both the pathogenesis of SARS-CoV-2 infection and the immune responses in COVID-19 patients in order to develop effective therapeutics and vaccines. One type of cell that may contribute to these immune responses is the cd T lymphocyte, which plays a key role in immunosurveillance of the mucosal and epithelial barriers by rapidly responding to pathogens. Although found in low numbers in blood, cd T cells consist the majority of tissue-resident T cells and participate in the front line of the host immune defense. Previous studies have demonstrated the critical protective role of cd T cells in immune responses to other respiratory viruses, including SARS-CoV-1. However, no studies have profoundly investigated these cells in COVID-19 patients to date. cd T cells can be safely expanded in vivo using existing inexpensive FDA-approved drugs such as bisphosphonate, in order to test its protective immune response to SARS-CoV-2. To support this line of research, we review insights gained from previous coronavirus research, along with recent findings, discussing the potential role of cd T cells in controlling SARS-CoV-2. We conclude by proposing several strategies to enhance cd T cell's antiviral function, which may be used in developing therapies for COVID-19.

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49The impact of a range of different threats has resulted in the listing of six out of seven sea turtle 50 species on the IUCN Red List of endangered species. Disease risk analysis (DRA) tools are designed to 51 provide objective, repeatable and documented assessment of the disease risks for a population and 52 measures to reduce these risks through management options. To the best of our knowledge, DRAs 53 have not previously been published for sea turtles, although disease is reported to contribute to sea 54 turtle population decline. Here, a comprehensive list of health hazards is provided for all seven 55 species of sea turtles. The possible risk these hazards pose to the health of sea turtles were assessed 56 and "One Health" aspects of interacting with sea turtles were also investigated. The risk assessment 57 was undertaken in collaboration with more than 30 experts in the field including veterinarians, 58 microbiologists, social scientists, epidemiologists and stakeholders, in the form of two international 59 workshops and one local workshop. The general finding of the DRA was the distinct lack of 60 knowledge regarding a link between the presence of pathogens and diseases manifestation in sea 61 turtles. A higher rate of disease in immunocompromised individuals was repeatedly reported and a 62 possible link between immunosuppression and environmental contaminants as a result of 63 anthropogenic influences was suggested. Society based conservation initiatives and as a result the 64 cultural and social aspect of interacting with sea turtles appeared to need more attention and 65 research. A risk management workshop was carried out to acquire the insights of local policy makers 66 about management options for the risks relevant to Queensland and the options were evaluated 67 considering their feasibility and effectiveness. The sea turtle DRA presented here, is a structured 68 guide for future risk assessments to be used in specific scenarios such as translocation and head-69 starting programs. 70 71 72 73 3 74 101 Species Survival Commission in 2014. The manual addresses different scenarios for endangered 102 species and translocating them for conservation purposes and enables the pros and cons of these 103actions to be thoroughly investigated (11). In order to accommodate the unique biology of sea 104 turtles, the DRA process as described in this manual requires certain modifications to realistically 105 articulate with situations such as translocating animals or investigating the risks of disease for a 106 population in its normal habitat. A 2015 study describes a systematic approach to investigate 107 disease-related population decline without confining the assessment to a particular scenario or 108 location (6). This method is a modified version of a DRA based on epidemiological principles (6) for 109 any declining wildlife population. A successful DRA considers the study population in the context of 110 the environment. 111In the 1960's, Calvin Schwabe coined the term "One Medicine" which then extended ...