The n-alkyl halides, RX, were oxidatively added to the platina(II)cyclopentane complexes [Pt[(CH2)4](NN)], in which NN = bpy (2,2'-bipyridyl) or phen (1,10-phenanthroline), to give the platinum(IV) complexes [PtRX[(CH2)4](NN)], R = Et and X = Br or I; R = nBu and X = I, 1-3. The same reactions with the analogous dimethyl complex [PtMe2(bpy)] gave the expected platinum(IV) complexes [PtRXMe2(bpy)], R = Et or nPr and X = Br or I; R = nBu and X = I, 4-8. Kinetics of the reactions in benzene and acetone was studied using UV-vis spectrophotometery and a common S(N)2 mechanism was suggested for each case. The platina(ii)cyclopentane complexes reacted faster than the corresponding dimethyl analogs by a factor of 2-3. This is described as being due to a lower positive charge, calculated by density functional theory (DFT), on the platinum atom of [Pt[(CH)2)4](bpy)] compared with that on the platinum atom of the dimethyl analog [PtMe2(bpy)]. The values of DeltaDeltaS(double dagger) = DeltaS(double dagger)(acetone) - DeltaS(double dagger)(benzene) were found to be either positive or negative in different reactions and this is related to the solvation of the corresponding alkyl halide. It is suggested that in these reactions of RX reagents, for a given X, the electronic effects of the R group are mainly responsible for the change in the rates of the reactions and the bulkiness of the group is far less important.
The present study investigates the binding interaction between a water-soluble Schiff base, N,N'-bis{5-[(triphenylphosphonium chloride)-methyl]salicylidine}-o-phenylenediamine (SF), and calf thymus DNA (CT-DNA) using emission, absorption, circular dichroism, and viscosity studies. In fluorimetric studies, the dynamic enhancement constant (K(D)) and bimolecular enhancement constant (K(B)) were calculated at different temperatures and demonstrated that fluorescence enhancement is not initiated by a dynamic process, but instead by a static process that involves complex DNA formation in the ground state. Further, the enthalpy and entropy of the reaction between SF and CT-DNA showed that the reaction is exothermic and enthalpy-favored (DeltaH = -153.51 kJ mol(-1); DeltaS = -427.67 J mol(-1) K). In addition, detectable changes in the circular dichroism spectrum of CT-DNA in the presence of SF indicated deep conformational changes in the DNA double helix following interaction with SF. Further, the Schiff base at different concentrations is able to perform cleavage of pUC18 plasmid DNA. All these results prove that SF interacts with CT-DNA via an intercalative mode of binding.
The interaction of methyldopa [(S)-2-amino-3-(3,4-dihydroxyphenyl)-2-methyl propanoic acid] (MDP), antihypertensive drug, with calf thymus DNA (ct-DNA) was investigated by spectroscopic and viscometric techniques. According to the results arising from the fluorescence spectra, viscosity measurements and molecular modeling studies; we concluded that MDP is a minor groove binder of ct-DNA and preferentially binds to AT rich regions. Ethidium bromide (EB) displacement studies revealed that MDP did not have any effect on EB bound DNA which is indicative of groove binding. This was substantiated by displacement studies with Hoechst 33258, a known minor groove binder. In addition, the thermodynamic and docking parameters showed that hydrophobic interaction via drug aromatic rings inside the DNA minor groove plays a major role in this binding.
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