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Multimodal eye recognition can improve the biometric systems recognition accuracy by combining iris and sclera recognition. However, poor quality images can significantly affect the system performance. In this paper, we proposed a quality fusion based multimodal eye recognition. Our quality measure evaluated the entire eye image quality, iris area quality, and sclera area quality. The experimental results show that our overall iris and sclera quality scores are highly correlated to recognition accuracy, and our quality fusion based eye recognition can improve and predict the performance of eye recognition systems.