No abstract

Leaf litter is a very important primary source of energy in woodland streams. Decomposition of leaf litter is a process mediated by many groups of microorganisms which release extracellular enzymes for the degradation of complex macromolecules. In this process, true fungi and straminipiles are considered to be among the most active groups, more active than the bacteria, at least during the early stages of the process. Colonization increases the quality of the leaves as a food resource for detritivores. In this way, matter and energy enter detritusbased food chains. Previously, aquatic hyphomycetes were considered to be the major fungal group responsible for leaf litter decomposition. Although zoosporic fungi and straminipiles are known to colonize and decompose plant tissues in various environments, there is scant information on their roles in leaf decomposition. This study focuses on the communities of zoosporic fungi and straminipiles in a stream which are involved in the decomposition of leaves of two plant species, Ligustrum lucidum and Pouteria salicifolia, in the presence of other groups of fungi. A characteristic community dominated by Nowakowskiella elegans, Phytophthora sp., and Pythium sp. was found. Changes in the fungal community structure over time (succession) was observed: terrestrial mitosporic fungi appeared during the early stages, zoosporic fungi, straminipiles, and aquatic Hyphomycetes in early-to-intermediate stages, while representatives of the phylum Zygomycota were found at early and latest stages of the decomposition. These observations highlight the importance of zoosporic fungi and straminipiles in aquatic ecosystems.

a b s t r a c tOomycete diversity has been generally underestimated, despite their ecological and economic importance. Surveying unexplored natural ecosystems with up-to-date molecular diversity tools can reveal the existence of unsuspected organisms. Here, we have explored the molecular diversity of five microhabitats located in five different oligotrophic peat bogs in the Jura Mountains using a highthroughput sequencing approach (Illumina HiSeq 2500). We found a total of 34 different phylotypes distributed in all major oomycete clades, and comprising sequences affiliated to both well-known phylotypes and members of undescribed, basal clades. Parasitic species, including obligate forms were well-represented, and phylotypes related to highly damaging invasive pathogens (Aphanomyces astaci: X1100 and Saprolegnia parasitica: X1602) were retrieved. Microhabitats differed significantly in their community composition, and many phylotypes were strongly affiliated to free water habitats (pools). Our approach proved effective in screening oomycete diversity in the studied habitat, and could be applied systematically to other environments and other fungal and fungal-like groups.

The Saprolegnia-Achlya clade comprises species of major environmental and economic importance due to their negative impact on aquaculture and aquatic ecosystems by threatening fishes, amphibians, and crustaceans. However, their taxonomy and phylogenetic relationships remain unresolved and suffer from many inconsistencies, which is a major obstacle to the widespread application of molecular barcoding to identify pathogenic strains with quarantine implications. We assessed phylogenetic relationships of major genera using three commonly used markers (ITS, SSU rRNA, and LSU rRNA). A consensus tree of the three genes provided support for nine clades encompassing eleven documented genera and a new clade (SAP1) that has not been described morphologically. In the course of this study, we isolated a new species, Newbya dichotoma sp. nov., which provided the only culture available for this genus. In parallel, we attempted to summarize the evolution of traits in the different genera, but their successive reversals rendered the inference of ancestral states impossible. This highlights even more the importance of a bar-coding strategy for saprolegniacean parasite detection and monitoring.

Zoosporic organisms are common inhabitants of aquatic environments; however there are few ecological studies made for Argentinean streams. In this contribution the taxonomic composition of zoosporic organisms from a stream and their abundance, frequency and diversity on cellulosic baits were analyzed. Samples of water and floating organic matter (vegetable debris) were taken at four dates and different environmental variables (temperature, dissolved oxygen and nutrient concentrations) were measured. Twenty-one taxa were recovered with the baiting technique. Physicochemical fluctuations affected the structure of the studied community; in spring the greatest species richness was related to high nutrient levels whereas in winter the greatest abundance and diversity was related to low water temperature, nutrient levels and well oxygenated conditions. aquatic environment,

A phylogenetically diverse set of seventeen isolates of Chytridiomycota were selected for a study of the utilization of common carbohydrates as sole carbon sources in synthetic media. Rhizophlyctis rosea AUS 13 is capable of the digestion of crystalline cellulose in the form of lens paper, filter paper and powdered filter paper and grows well with noncrystaline carboxymethyl cellulose or cellobiose, but cannot use starch or maltose as sole carbon sources in liquid and on solid media. None of the other sixteen isolates tested can digest crystalline cellulose, but all grow well on starch and maltose and several can also use cellobiose and/or sucrose as a sole carbon source. Four of the other sixteen isolates could also digest carboxymethyl cellulose slowly. Glucose is an excellent sole source of carbon in synthetic media for all seventeen isolates in the present study. In general, these data suggest variability in the ability of zoosporic true fungi to use carbohydrates other than glucose as sole sources of carbon. Four patterns of carbohydrate utilization emerged from this study of seventeen isolates. R. rosea degrades cellulose over a relatively wide pH range which suggests that the cellulase enzymes are stable over a wide pH range.

Here, we studied the ecological significance of Saprolegnia infections ('saprolegniasis') on the survival and development of two populations of the endemic Patagonian anuran Pleurodema thaul (Anura, Leiuperidae).We found that four different Saprolegnia species infected eggs and embryos of P. thaul, indicating that the infection by these 'zoosporic fungi' was different in each anuran population and among different cohorts. Late anuran cohorts generally showed a higher incidence of infection than early cohorts, but we observed no clear overall pattern between populations. In addition, in laboratory experiments, we determined that some of the Saprolegnia species induce early hatching, and that hatching timing was variable between populations. In summary, we found that early breeding (by underlying priority effects) could improve the survival of the earliest cohorts of P. thaul by allowing them to survive the stress imposed by epidemic events of Saprolegnia.

Saprolegnia multispora is described from water and floating organic matter taken in the Tille River, in the Burgundian region of France. The new species is illustrated and compared with other species of the genus. Distinguishing characteristics of S. multispora are the production of smooth‐walled oogonia containing many subcentric oospores which are (1−) 11–70 (−100) per oogonium. The antheridial branches supplying the oogonia are predominantly diclinous, but at times these may be monoclinous and androgynous. Morphological features of the oomycete and the sequence of the ITS region of its rDNA as well as their comparison with related species are discussed in this article.