Abstract:To better understand the genetic control of resin yield, growth traits and morphologic traits for Pinus elliottii families, genetic relationships among these traits were examined in three 27-year-old progeny trials located in Jingdezhen, Jian and Ganzhou, Jiangxi Province, China. In total, 3695 trees from 112 families were assessed at the three sites. Significant site, family and family × site effects were found for resin yield, growth traits and morphologic traits. Resin yield and growth traits were found to be under moderate genetic control for the three sites combined, with family heritability and individual narrow-sense heritability ranging from 0.41 to 0.55 and 0.11 to 0.27, respectively. The coefficient of genotypic variation (CV G ) of stem volume (SV) and crown surface area (CSA) were higher than those of other traits at each site. Genetic correlation estimates indicated that selection for growth traits might lead to a large increment in resin yield (RY), and most morphologic traits had moderate to strong correlations with growth traits at each individual site. One possible strategy in tree breeding would be to maximize resin production through selection for growth traits.
ObjectivesIn a genome-wide association study, we discovered chromosome 12q15 (defined as rs73329476) as a silica-related pneumoconiosis susceptibility region. However, the causal variants in this region have not yet been reported.MethodsWe systematically screened eight potentially functional single-neucleotide polymorphism (SNPs) in the genes near rs73329476 (carboxypeptidase M (CPM) and cleavage and polyadenylation specific factor 6 (CPSF6)) in a case–control study including 177 cases with silicosis and 204 healthy controls, matched to cases with years of silica dust exposure. We evaluated the associations between these eight SNPs and the development of silicosis. Luciferase reporter gene assays were performed to test the effects of selected SNP on the activity of CPM in the promoter. In addition, a two-stage case–control study was performed to investigate the expression differences of the two genes in peripheral blood leucocytes from a total of 64 cases with silicosis and 64 healthy controls with similar years of silica dust exposure as the cases.ResultsWe found a strong association between the mutant rs12812500 G allele and the susceptibility of silicosis (OR=1.45, 95% CI 1.03 to 2.04, p=0.034), while luciferase reporter gene assays indicated that the mutant G allele of rs12812500 is strongly associated with increased luciferase levels compared with the wild-type C allele (p<0.01). Moreover, the mRNA (peripheral blood leucocytes) expression of the CPM gene was significantly higher in subjects with silicosis compared with healthy controls.ConclusionsThe rs12812500 variant of the CPM gene may increase silicosis susceptibility by affecting the expression of CPM, which may contribute to silicosis susceptibility with biological plausibility.
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