Health Care and Life Sciences (HCLS) have long been a test-bed for the standards proposed by the W3C to build the Semantic Web 1 : since HCLS is descriptive by nature and its descriptions have traditionally been produced according to ad-hoc schemas in isolated resources, HCLS offers an ideal use case for technologies like RDF 2 , SPARQL 3 and OWL 4 [1,4]. This "marriage" of the HCLS domain with semantic technologies has resulted in a collection of resources that can be regarded as an HCLS-focused working implementation of the idea of the Semantic Web: the socalled Life Sciences Semantic Web (LSSW).As part of the process of implementing the LSSW, the HCLS community has adopted the Linked Data practices to publish information in a machine-friendly and linkable fashion [3], as a "down-to-earth" version of a prospective fully-fledged Semantic Web. This has resulted in members of the HCLS community, like the W3C HCLS Interest Group 5 , considerably contributing to the Linked Open Data (LOD) endeavour, with datasets like Bio2RDF [2] and Linked Open Drug Data (LODD) [5].As the LOD network grows, producers and consumers alike are facing new challenges regarding interoperable vocabularies, filtering, graphical interfaces, 1 http://www.w3.org/standards/semanticweb/ 2 http://www.w3.org/standards/techs/rdf 3 http://www.w3.org/standards/techs/sparql 4 http://www.w3.org/standards/techs/owl 5 http://www.w3.org/blog/hcls/ best practices for dataset production, dataset quality evaluation, role of automated reasoning, etc. The aim of this special issue is to showcase some of the latest developments in the application of Linked Data in HCLS and help pave the way to solve such challenges. The issue comprises the following manuscripts: in "Applying Linked Data Approaches to Pharmacology: Architectural Decisions and Implementation" Alasdair J.G. Gray et al. describe the technical decisions made when building the Open Pharmacological Space (OPS), a drug discovery platform part of the Open PHACTS project 6 ; in "Using the relation ontology Metarel for modelling Linked Data as multi-digraphs" Ward Blondé et al. describe Metarel, an ontology that describes class-level relations that can be used for SPARQL queries; in "A collaborative methodology for developing a semantic model for interlinking Cancer Chemoprevention linked-data sources" Dimitris Zeginis et al. describe how they used a new collaborative methodology to build a semantic model related to cancer chemoprevention.The manuscripts went through a rigorous review process in which half of the submissions were accepted. We would like to thank the referees for their time and effort:
OGOLOD is a Linked Open Data dataset derived from different biomedical resources by an automated pipeline, using a tailored ontology as a scaffold. The key contribution of OGOLOD is that it links, in new RDF triples, genetic human diseases and orthologous genes, paving the way for a more efficient translational biomedical research exploiting the Linked Open Data cloud.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
customersupport@researchsolutions.com
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
This site is protected by reCAPTCHA and the Google Privacy Policy and Terms of Service apply.
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.