Aquatic vegetation is an important component of wetland and coastal ecosystems, playing a key role in the ecological functions of these environments. Surveys of macrophyte communities are commonly hindered by logistic problems, and remote sensing represents a powerful alternative, allowing comprehensive assessment and monitoring. Also, many vegetation characteristics can be estimated from reflectance measurements, such as species composition, vegetation structure, biomass, and plant physiological parameters. However, proper use of these methods requires an understanding of the physical processes behind the interaction between electromagnetic radiation and vegetation, and remote sensing of aquatic plants have some particular difficulties that have to be properly addressed in order to obtain successful results. The present paper reviews the theoretical background and possible applications of remote sensing techniques to the study of aquatic vegetation.

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An intercomparison of radiance and irradiance ocean color radiometers (the second laboratory comparison exercise—LCE-2) was organized within the frame of the European Space Agency funded project Fiducial Reference Measurements for Satellite Ocean Color (FRM4SOC) May 8–13, 2017 at Tartu Observatory, Estonia. LCE-2 consisted of three sub-tasks: (1) SI-traceable radiometric calibration of all the participating radiance and irradiance radiometers at the Tartu Observatory just before the comparisons; (2) indoor, laboratory intercomparison using stable radiance and irradiance sources in a controlled environment; (3) outdoor, field intercomparison of natural radiation sources over a natural water surface. The aim of the experiment was to provide a link in the chain of traceability from field measurements of water reflectance to the uniform SI-traceable calibration, and after calibration to verify whether different instruments measuring the same object provide results consistent within the expected uncertainty limits. This paper describes the third phase of LCE-2: The results of the field experiment. The calibration of radiometers and laboratory comparison experiment are presented in a related paper of the same journal issue. Compared to the laboratory comparison, the field intercomparison has demonstrated substantially larger variability between freshly calibrated sensors, because the targets and environmental conditions during radiometric calibration were different, both spectrally and spatially. Major differences were found for radiance sensors measuring a sunlit water target at viewing zenith angle of 139° because of the different fields of view. Major differences were found for irradiance sensors because of imperfect cosine response of diffusers. Variability between individual radiometers did depend significantly also on the type of the sensor and on the specific measurement target. Uniform SI traceable radiometric calibration ensuring fairly good consistency for indoor, laboratory measurements is insufficient for outdoor, field measurements, mainly due to the different angular variability of illumination. More stringent specifications and individual testing of radiometers for all relevant systematic effects (temperature, nonlinearity, spectral stray light, etc.) are needed to reduce biases between instruments and better quantify measurement uncertainties.

The light field and its relationship with biogeochemical variables were investigated in the Solimões, Negro, Amazon, Madeira, Uatumã, Trombetas, and Tapajós Rivers. In high suspended sediment rivers, total suspended matter is the primary control on light attenuation (r = 0.8), with colored dissolved organic matter (CDOM) being secondary (r = -0.6) due to scattering and absorption, respectively. Photosynthetically active radiation was the lowest (\100.0 lmol m -2 s -1 at the depth of half Z 1% ) and was limited to depths of less than 1.0 m and confined to red light. In low suspended sediment rivers, CDOM is the primary control on light attenuation (r = 0.9). The concentrations of chlorophyll a (Chla) and CDOM cause variations among these rivers. High CDOM rivers, Negro and Uatumã, are depleted (\0.5% of incoming irradiance) of blue and green light at the depth of half Z 1% . The light spectra of low CDOM and higher Chla waters, such as the Tapajós, Uatumã, and Trombetas Rivers at rising water stage, are restricted to green and red wavelengths, and marked by high absorption at 620 and 670 nm, due to the presence of Cyanophyceae.

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