Population health decision makers must consider complex relationships between multiple concepts measured with differential accuracy from heterogeneous data sources. Population health information systems are currently limited in their ability to integrate data and present a coherent portrait of population health. Consequentially, these systems can provide only basic support for decision makers. The Population Health Record (PopHR) is a semantic web application that automates the integration and extraction of massive amounts of heterogeneous data from multiple distributed sources (e.g., administrative data, clinical records, and survey responses) to support the measurement and monitoring of population health and health system performance for a defined population. The design of the PopHR draws on the theories of the determinants of health and evidence-based public health to harmonize and explicitly link information about a population with evidence about the epidemiology and control of chronic diseases. Organizing information in this manner and linking it explicitly to evidence is expected to improve decision making related to the planning, implementation, and evaluation of population health and health system interventions. In this paper, we describe the PopHR platform and discuss the architecture, design, key modules, and its implementation and use.
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The burgeoning field of Artificial Intelligence (AI) has the potential to profoundly impact the public’s health. Yet, to make the most of this opportunity, decision-makers must understand AI concepts. In this article, we describe approaches and fields within AI and illustrate through examples how they can contribute to informed decisions, with a focus on population health applications. We first introduce core concepts needed to understand modern uses of AI and then describe its sub-fields. Finally, we examine four sub-fields of AI most relevant to population health along with examples of available tools and frameworks. Artificial intelligence is a broad and complex field, but the tools that enable the use of AI techniques are becoming more accessible, less expensive, and easier to use than ever before. Applications of AI have the potential to assist clinicians, health system managers, policy-makers, and public health practitioners in making more precise, and potentially more effective, decisions.
Background: The Canadian epidemics of COVID-19 exhibit distinct early trajectories, with Québec bearing a very high initial burden. The semaine de relâche, or March break, took place two weeks earlier in Québec as compared to the rest of Canada. This event may have played a role in the spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). We aimed to examine the role of case importation in the early transmission dynamics of SARS-CoV-2 in Québec. Methods: Using detailed surveillance data, we developed and calibrated a deterministic SEIR-type compartmental model of SARS-CoV-2 transmission. We explored the impact of altering the number of imported cases on hospitalizations. Specifically, we investigated scenarios without case importation after March break, and as scenarios where cases were imported with the same frequency/timing as neighboring Ontario. Results: A total of 1,544 and 1,150 returning travelers were laboratory-confirmed in Québec and Ontario, respectively (with symptoms onset before 2020-03-25). The cumulative number of hospitalizations could have been reduced by 55% (95% credible interval [95%CrI]: 51-59%) had no cases been imported after Québec's March break. However, had Québec experienced Ontario's number of imported cases, cumulative hospitalizations would have only been reduced by 12% (95%CrI: 8-16%). Interpretation: Our results suggest that case importation played an important role in the early spread of COVID-19 in Québec. Yet, heavy importation of SARS-CoV-2 in early March could be insufficient to resolve interprovincial heterogeneities in cumulative hospitalizations. The importance of other factors -public health preparedness, responses, and capacity- should be investigated.
IntroductionData from electronic medical records is now readily available and records information needed in pharmacoepidemiological studies not usually found in administrative data such as risk factors and biometrics. Yet, EMR data leads to measurement error due to primary non-adherence. Bayesian bias correction could provide corrected estimates from administrative data. Objectives and ApproachWe present a method for correcting risk estimates from EMR data using linked data. In our example, we estimate the risk of cardiovascular events from oral-hypoglycemics in patients with type-2 diabetes in Boston, Quebec, and the UK between 2009 and 2012. Using linked EMR and administrative data in Quebec, we compute a positive and negative predicting value of prescription on dispensation for each class of oral-hypoglycemics. The cardiovascular risk is then analysed using a bayesian Weibull survival model adjusted for potential confounders. A similar model is then computed that accounts for exposure measurement error using the PPV and NPV. ResultsThe Quebec and Boston cohorts have similar sizes with 1197 and 2346 patients, but the UK was bigger at 41370 patients. In Quebec's data, there were important differences in PPV and NPV by class of oral-hypoglycemics with PPVs for Biguanides at 0.81, Sulphonylureas at 0.65, and others at 0.50. The pattern for NPV differed with the same classes having respectively values of 0.56, 0.97, and 0.99. Estimates from the naïve model are typical of similar analysis but compared to their correction, they were generally overprecise and biased towards the null. The adjusted estimated were adequately representing the increased uncertainty with hazard ratios for Sulphonylureas going from 1.72 (1.22, 2.41) to 3.19 (1.36, 5.93), and from 1.09 (0.86, 1.39) to 1.05 (0.45, 2.16) for no drugs Conclusion/ImplicationsBayesian adjustment for measurement error allowed us to use linked data to regenerate uncertainty and to correct the bias in our risk estimates. Our approach was impacted by the observed low predictive value of prescribing, by reduced transportability of our PPV and NPV estimates, and other sources of bias.
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