Drainage has turned peatlands from a carbon sink into one of the world's largest greenhouse gas (GHG) sources from cultivated soils. We analyzed a unique data set (12 peatlands, 48 sites and 122 annual budgets) of mainly unpublished GHG emissions from grasslands on bog and fen peat as well as other soils rich in soil organic carbon (SOC) in Germany. Emissions and environmental variables were measured with identical methods. Site-averaged GHG budgets were surprisingly variable (29.2 ± 17.4 t CO -eq. ha yr ) and partially higher than all published data and the IPCC default emission factors for GHG inventories. Generally, CO (27.7 ± 17.3 t CO ha yr ) dominated the GHG budget. Nitrous oxide (2.3 ± 2.4 kg N O-N ha yr ) and methane emissions (30.8 ± 69.8 kg CH -C ha yr ) were lower than expected except for CH emissions from nutrient-poor acidic sites. At single peatlands, CO emissions clearly increased with deeper mean water table depth (WTD), but there was no general dependency of CO on WTD for the complete data set. Thus, regionalization of CO emissions by WTD only will remain uncertain. WTD dynamics explained some of the differences between peatlands as sites which became very dry during summer showed lower emissions. We introduced the aerated nitrogen stock (N ) as a variable combining soil nitrogen stocks with WTD. CO increased with N across peatlands. Soils with comparatively low SOC concentrations showed as high CO emissions as true peat soils because N was similar. N O emissions were controlled by the WTD dynamics and the nitrogen content of the topsoil. CH emissions can be well described by WTD and ponding duration during summer. Our results can help both to improve GHG emission reporting and to prioritize and plan emission reduction measures for peat and similar soils at different scales.

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Abstract. Peat extraction leaves a land surface with a strong relief of deep cutover areas and higher ridges. Rewetting inundates the deep parts, while less deeply extracted zones remain at or above the water level. In temperate fens the flooded areas are colonized by helophytes such as Eriophorum angustifolium, Carex spp., Typha latifolia or Phragmites australis dependent on water depth. Reeds of Typha and Phragmites are reported as large sources of methane, but data on net CO 2 uptake are contradictory for Typha and rare for Phragmites. Here, we analyze the effect of vegetation, water level and nutrient conditions on greenhouse gas (GHG) emissions for representative vegetation types along water level gradients at two rewetted cutover fens (mesotrophic and eutrophic) in Belarus. Greenhouse gas emissions were measured campaign-wise with manual chambers every 2 to 4 weeks for 2 years and interpolated by modelling.All sites had negligible nitrous oxide exchange rates. Most sites were carbon sinks and small GHG sources. Methane emissions generally increased with net ecosystem CO 2 uptake. Mesotrophic small sedge reeds with water table around the land surface were small GHG sources in the range of 2.3 to 4.2 t CO 2 eq. ha −1 yr −1 . Eutrophic tall sedge -Typha latifolia reeds on newly formed floating mats were substantial net GHG emitters in the range of 25.1 to 39.1 t CO 2 eq. ha −1 yr. They represent transient vegetation stages. Phragmites reeds ranged between −1.7 to 4.2 t CO 2 eq. ha −1 yr −1 with an overall mean GHG emission of 1.3 t CO 2 eq. ha −1 yr −1 . The annual CO 2 balance was best explained by vegetation biomass, which includes the role of vegetation composition and species. Methane emissions were obviously driven by biological activity of vegetation and soil organisms.Shallow flooding of cutover temperate fens is a suitable measure to arrive at low GHG emissions. Phragmites australis establishment should be promoted in deeper flooded areas and will lead to moderate, but variable GHG emissions or even occasional sinks. The risk of large GHG emissions is higher for eutrophic than mesotrophic peatlands. Nevertheless, flooding of eutrophic temperate fens still represents a safe GHG mitigation option because even the hotspot of our study, the floating tall sedge -Typha latifolia reeds, did not exceed the typical range of GHG emissions from drained fen grasslands and the spatially dominant Phragmites australis reed emitted by far less GHG than drained fens.

Manual closed‐chamber measurements are commonly used to quantify annual net CO2 ecosystem exchange (NEE) in a wide range of terrestrial ecosystems. However, differences in both the acquisition and gap filling of manual closed‐chamber data are large in the existing literature, complicating inter‐study comparisons and meta analyses. The aim of this study was to compare common approaches for quantifying CO2 exchange at three methodological levels. (1) The first level included two different CO2 flux measurement methods: one via measurements during mid‐day applying net coverages (mid‐day approach) and one via measurements from sunrise to noon (sunrise approach) to capture a span of light conditions for measurements of NEE with transparent chambers. (2) The second level included three different methods of pooling measured ecosystem respiration (RECO) fluxes for empirical modeling of RECO: campaign‐wise (19 single‐measurement‐day RECO models), season‐wise (one RECO model for the entire study period), and cluster‐wise (two RECO models representing a low and a high vegetation status). (3) The third level included two different methods of deriving fluxes of gross primary production (GPP): by subtracting either proximately measured RECO fluxes (direct GPP modeling) or empirically modeled RECO fluxes from measured NEE fluxes (indirect GPP modeling). Measurements were made during 2013–2014 in a lucerne‐clover‐grass field in NE Germany. Across the different combinations of measurement and gap‐filling options, the NEE balances of the agricultural field diverged strongly (–200 to 425 g CO2‐C m−2). NEE balances were most similar to previous studies when derived from sunrise measurements and indirect GPP modeling. Overall, the large variation in NEE balances resulting from different data‐acquisition or gap‐filling strategies indicates that these methodological decisions should be made very carefully and that they likely add to the overall uncertainty of greenhouse gas emission factors. Preferably, a standard approach should be developed to reduce the uncertainty of upscaled estimates.

Abstract. Rewetting of temperate continental cutover peatlands generally implies the creation of flooded areas, which are – dependent on water depth – colonized by helophytes such as Eriophorum angustifolium, Carex spp., Typha latifolia or Phragmites australis. Reeds of Typha and Phragmites are reported to be large sources of methane, but data on net CO2 uptake are contradictory for Typha and rare for Phragmites. This paper describes the effect of vegetation, water level and nutrient conditions on greenhouse gas (GHG) emissions for representative vegetation types along water level gradients at two rewetted cutover fens (mesotrophic and eutrophic) in Belarus. Greenhouse emissions were measured with manual chambers in weekly to few – weekly intervals over a two years period and interpolated by modelling. All sites had negligible nitrous oxide exchange rates. Most sites were carbon sinks and small GHG sources. Methane emissions were generally associated with net ecosystem CO2 uptake. Small sedges were minor methane emitters and net CO2 sinks, while Phragmites australis sites released large amounts of methane and sequestered very much CO2. Variability of both fluxes increased with site productivity. Floating mats composed of Carex tussocks and Typha latifolia were a source for both methane and CO2. We conclude that shallow, stable flooding is a better measure to arrive at low GHG emissions than deep flooding, and that the risk of high GHG emissions consequent on rewetting is larger for eutrophic than for mesotrophic peatlands.

Abstract. The drainage and cultivation of fen peatlands create complex small-scale mosaics of soils with extremely variable soil organic carbon (SOC) stocks and groundwater levels (GWLs). To date, the significance of such sites as sources or sinks for greenhouse gases such as CO2 and CH4 is still unclear, especially if the sites are used for cropland. As individual control factors such as GWL fail to account for this complexity, holistic approaches combining gas fluxes with the underlying processes are required to understand the carbon (C) gas exchange of drained fens. It can be assumed that the stocks of SOC and N located above the variable GWL – defined as dynamic C and N stocks – play a key role in the regulation of the plant- and microbially mediated CO2 fluxes in these soils and, inversely, for CH4. To test this assumption, the present study analysed the C gas exchange (gross primary production – GPP; ecosystem respiration – Reco; net ecosystem exchange – NEE; CH4) of maize using manual chambers for 4 years. The study sites were located near Paulinenaue, Germany, where we selected three soil types representing the full gradient of GWL and SOC stocks (0–1 m) of the landscape: (a) Haplic Arenosol (AR; 8 kg C m−2); (b) Mollic Gleysol (GL; 38 kg C m−2); and (c) Hemic Histosol (HS; 87 kg C m−2). Daily GWL data were used to calculate dynamic SOC (SOCdyn) and N (Ndyn) stocks. Average annual NEE differed considerably among sites, ranging from 47 ± 30 g C m−2 yr−1 in AR to −305 ± 123 g C m−2 yr−1 in GL and −127 ± 212 g C m−2 yr−1 in HS. While static SOC and N stocks showed no significant effect on C fluxes, SOCdyn and Ndyn and their interaction with GWL strongly influenced the C gas exchange, particularly NEE and the GPP : Reco ratio. Moreover, based on nonlinear regression analysis, 86% of NEE variability was explained by GWL and SOCdyn. The observed high relevance of dynamic SOC and N stocks in the aerobic zone for plant and soil gas exchange likely originates from the effects of GWL-dependent N availability on C formation and transformation processes in the plant–soil system, which promote CO2 input via GPP more than CO2 emission via Reco. The process-oriented approach of dynamic C and N stocks is a promising, potentially generalisable method for system-oriented investigations of the C gas exchange of groundwater-influenced soils and could be expanded to other nutrients and soil characteristics. However, in order to assess the climate impact of arable sites on drained peatlands, it is always necessary to consider the entire range of groundwater-influenced mineral and organic soils and their respective areal extent within the soil landscape.

Abstract. Carbon (C) sequestration in soils plays a key role in the global C cycle. It is therefore crucial to adequately monitor dynamics in soil organic carbon ( SOC) stocks when aiming to reveal underlying processes and potential drivers. However, small-scale spatial (10-30 m) and temporal changes in SOC stocks, particularly pronounced in arable lands, are hard to assess. The main reasons for this are limitations of the well-established methods. On the one hand, repeated soil inventories, often used in long-term field trials, reveal spatial patterns and trends in SOC but require a longer observation period and a sufficient number of repetitions. On the other hand, eddy covariance measurements of C fluxes towards a complete C budget of the soil-plant-atmosphere system may help to obtain temporal SOC patterns but lack small-scale spatial resolution.To overcome these limitations, this study presents a reliable method to detect both short-term temporal dynamics as well as small-scale spatial differences of SOC using measurements of the net ecosystem carbon balance (NECB) as a proxy. To estimate the NECB, a combination of automatic chamber (AC) measurements of CO 2 exchange and empirically modeled aboveground biomass development (NPP shoot ) were used. To verify our method, results were compared with SOC observed by soil resampling.Soil resampling and AC measurements were performed from 2010 to 2014 at a colluvial depression located in the hummocky ground moraine landscape of northeastern Germany. The measurement site is characterized by a variable groundwater level (GWL) and pronounced small-scale spatial heterogeneity regarding SOC and nitrogen (Nt) stocks. Tendencies and magnitude of SOC values derived by AC measurements and repeated soil inventories corresponded well. The period of maximum plant growth was identified as being most important for the development of spatial differences in annual SOC. Hence, we were able to confirm that AC-based C budgets are able to reveal small-scale spatial differences and short-term temporal dynamics of SOC.