Abstract— A comparison of the spectra of in vitro (3‐hydroxymethyl‐131‐oxometallochlorin) and in vivo chlorosomal (bacterio‐chlorophyll‐c) aggregates suggests a similar supramolecular structure for the artificial oligomers and the bacte‐riochlorophyll‐c aggregates in the extramembranous antenna complexes (chlorosomes) of green photosynthetic bacteria. Synthetic zinc and magnesium chlorins have been found to aggregate in 1 % (vol/vol) tetrahydrofuran and hexane solutions and in thin films to form oligomers with the Qy absorption bands shifted to longer wavelengths by about 1900 (Zn chlorins) and 2100 cm−1 (Mg) relative to the corresponding monomer bands. Visible absorption and circular dichroism spectra of various zinc chlorins establish that a central metal, a 31‐hydroxy and a 131‐keto group are functional prerequisites for the aggregation. Vibrational bands measured by IR spectroscopy of solid films reveal two characteristic structural features of the oligomers: (1) a five‐coordinated metallochlorin macrocycle with an axial ligand (bands at 1500‐1630 cm−1), and (2) a hydrogen bond between the keto oxygen of one chlorin and the hydroxy group of a second chlorin, the oxygen of which is chelated to the metal atom of a third molecule, i.e. C=O…H‐O…M (=Zn or Mg).
Metal 3(1)-hydroxy-13(1)-oxo-chlorins were systematically prepared and their visible and circular dichroism spectra were measured in a solution. All the synthetic complexes were monomeric in tetrahydrofuran. The Ni/Cu/Pd/Ag(II) complexes were still monomeric after dilution with 99-fold hexane. In contrast, the Co(II) complex, as well as the Mg/Zn/Cd(II) complexes, self-aggregated in 1% (v/v) tetrahydrofuran-hexane to form oligomers. In the less polar organic solvent, the Mn(III) complex fully dimerized and the Fe(III) complex partially dimerized. Infrared spectra of the synthetic metal chlorins in solid thin films revealed that the Ni/Cu/Pd/Ag(II) and ClFe(III) chlorins were 4- and 5-coordinated monomers, respectively, the AcOMn(III) chlorin formed a 6-coordinated dimer by mutual coordination of 3(1)-OetaetaetaMn, and the Co(II) chlorin as well as the Mg/Zn/Cd(II) chlorins self-aggregated by 13-C=OetaetaetaO-Hetaetaetametal to form large oligomers.
Solid-state NMR is an emerging method to obtain structural information in molecular biology and nanotechnology for systems that are inaccessible to solution NMR or diffraction methods. While solution NMR generally converges upon families of structures in a bottom-up approach, solid NMR structure determination will have to take into account the top-down constraints that follow from the additional requirement that the entire 3D space must be packed in an orderly fashion. We used MAS NMR together with molecular modeling calculations in steps to establish a detailed model of the local crystal structure of an aggregate of uniformly 13C- and 15N-labeled Cd-chlorophyllide d, a model for the chlorosomal antennae. In this way we converge upon a space group P21 with a = 14.3 A, b = 27.3 A, c = 6.4 A, beta = 147.2 degrees and Z = 2.
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