In this paper, we formalize the problem of Basic Graph Pattern (BGP) optimization for SPARQL queries and main memory graph implementations of RDF data. We define and analyze the characteristics of heuristics for selectivitybased static BGP optimization. The heuristics range from simple triple pattern variable counting to more sophisticated selectivity estimation techniques. Customized summary statistics for RDF data enable the selectivity estimation of joined triple patterns and the development of efficient heuristics. Using the Lehigh University Benchmark (LUBM), we evaluate the performance of the heuristics for the queries provided by the LUBM and discuss some of them in more details.
The document-centric workflows in science have reached (or already exceeded) the limits of adequacy. This is emphasized by recent discussions on the increasing proliferation of scientific literature and the reproducibility crisis. This presents an opportunity to rethink the dominant paradigm of document-centric scholarly information communication and transform it into knowledgebased information flows by representing and expressing information through semantically rich, interlinked knowledge graphs. At the core of knowledge-based information flows is the creation and evolution of information models that establish a common understanding of information communicated between stakeholders as well as the integration of these technologies into the infrastructure and processes of search and information exchange in the research library of the future. By integrating these models into existing and new research infrastructure services, the information structures that are currently still implicit and deeply hidden in documents can be made explicit and directly usable. This has the potential to revolutionize scientific work as information and research results can be seamlessly interlinked with each other and better matched to complex information needs. Furthermore, research results become directly comparable and easier to reuse. As our main contribution, we propose the vision of a knowledge graph for science, present a possible infrastructure for such a knowledge graph as well as our early attempts towards an implementation of the infrastructure. * This invited article accompanies Sören Auer's WIMS2018 keynote.
Abstract. This research explores three SPARQL-based techniques to solve Semantic Web tasks that often require similarity measures, such as semantic data integration, ontology mapping, and Semantic Web service matchmaking. Our aim is to see how far it is possible to integrate customized similarity functions (CSF) into SPARQL to achieve good results for these tasks. Our first approach exploits virtual triples calling property functions to establish virtual relations among resources under comparison; the second approach uses extension functions to filter out resources that do not meet the requested similarity criteria; finally, our third technique applies new solution modifiers to post-process a SPARQL solution sequence. The semantics of the three approaches are formally elaborated and discussed. We close the paper with a demonstration of the usefulness of our iSPARQL framework in the context of a data integration and an ontology mapping experiment.
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Abstract. The vision of semantic business processes is to enable the integration and inter-operability of business processes across organizational boundaries. Since different organizations model their processes differently, the discovery and retrieval of similar semantic business processes is necessary in order to foster inter-organizational collaborations. This paper presents our approach of using iSPARQL-our imprecise query engine based on SPARQL-to query the OWL MIT Process Handbooka large collection of over 5000 semantic business processes. We particularly show how easy it is to use iSPARQL to perform the presented process retrieval task. Furthermore, since choosing the best performing similarity strategy is a non-trivial, data-, and context-dependent task, we evaluate the performance of three simple and two human-engineered similarity strategies. In addition, we conduct machine learning experiments to learn similarity measures showing that complementary information contained in the different notions of similarity strategies provide a very high retrieval accuracy. Our preliminary results indicate that iSPARQL is indeed useful for extending the reach of queries and that it, therefore, is an enabler for inter-and intra-organizational collaborations.
Instruments play an essential role in creating research data. Given the importance of instruments and associated metadata to the assessment of data quality and data reuse, globally unique, persistent and resolvable identification of instruments is crucial. The Research Data Alliance Working Group Persistent Identification of Instruments (PIDINST) developed a community-driven solution for persistent identification of instruments which we present and discuss in this paper. Based on an analysis of 10 use cases, PIDINST developed a metadata schema and prototyped schema implementation with DataCite and ePIC as representative persistent identifier infrastructures and with HZB (Helmholtz-Zentrum Berlin für Materialien und Energie) and BODC (British Oceanographic Data Centre) as representative institutional instrument providers. These implementations demonstrate the viability of the proposed solution in practice. Moving forward, PIDINST will further catalyse adoption and consolidate the schema by addressing new stakeholder requirements.
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