The objective of this work was to estimate the changes in abundance and composition of phytoplankton in a coastal lagoon in Baja California, México during neap-spring tide conditions. Sampling was conducted from the 7 th to the 16 th of October 2004. Surface water was collected at 18 stations distributed across the bay during day time at high tide. Also, a time series was collected at a fixed station; surface water was collected every two hours from 8:00 to 18:00. High temperatures, low salinities and low nutrient concentrations at the oceanic end indicated weak or non upwelling conditions during this period. The phytoplankton community was characterized using an inverted microscope and the chemical taxonomy program CHEMTAX, based on pigment concentration estimated by high performance liquid chromatography (HPLC). The phytoplankton concentration was two times lower during this period than during periods of upwelling in the same year. Cryptophytes and diatoms were the most abundant groups estimated by CHEMTAX. Statistical analyses of the effect of tidal conditions on phytoplankton composition indicate that Zone A is strongly affected by tides, and that tidal effects are lessened at the inner zones. Differences in phytoplankton abundance between zones and between tidal conditions indicate that phytoplankton distribution is patchy in the lagoon.
A time series with weekly sampling was conducted from February 20, to December 16, 2011 at a station in the interior of the San Quintín Bay to estimate seasonal changes in the composition and abundance of phytoplankton. Water temperature was recorded and the upwelling index was calculated for the period. Phytoplankton abundance was estimated and phytoplankton were identified by using an inverted microscope and the CHEMTAX program. There were 16 positive phytoplankton anomalies during the year, but only three were considered to be blooms. The blooms were dominated by diatoms and were recorded in the winter, spring and summer. Different genera composed 80% of the total phytoplankton abundance of each of the blooms. The first bloom consisted of diatoms of the genera Pseudo-nitzschia sp. (15.7%), Skeletonema sp. (14.6%), Eucampia sp. (7%), and Navicula sp. (7%); a haptophyte of the genus Imantonia sp. (13.1%); and dinoflagellates of the genus Prorocentrum sp. (4.6%). The second bloom consisted mainly of diatoms of the genera Guinardia sp. (30.6%), Pseudo-nitzschia sp. (21.5%), Skeletonema sp. (14.5%), Chaetoceros sp. (8.4%) and Eucampia sp. (5.3%). The third bloom consisted of Chaetoceros sp. (46.3%), Pseudo-nitzschia sp. (22.6%), Skeletonema sp. (7.29%), and Imantonia sp. (6%). Dinoflagellates were observed in the winter, summer and autumn, but they contributed less biomass than diatoms. Prorocentrum sp., Gymnodinium sp., and Ceratium sp. were among the dinoflagellates that were observed. The differences in abundance and composition of phytoplankton groups in the blooms in San Quintín Bay during 2011 were due primarily to seasonal changes in the physical and chemical factors of the seawater and to upwelling events.
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