Accuracy and interpretability are often seen as the devil and holy grail in computational spectroscopy and their reconciliation remains a primary research goal. In the last few decades, density functional theory has revolutionized the situation, paving the way to reliable yet effective models for medium size molecules, which could also be profitably used by non-specialists. In this contribution we will compare the results of some widely used hybrid and double hybrid functionals with the aim of defining the most suitable recipe for all the spectroscopic parameters of interest in rotational and vibrational spectroscopy, going beyond the rigid rotor/harmonic oscillator model. We will show that last-generation hybrid and double hybrid functionals in conjunction with partially augmented double-and triple-zeta basis sets can offer, in the framework of second order vibrational perturbation theory, a general, robust, and user-friendly tool with unprecedented accuracy for medium-size semi-rigid molecules.
The accurate characterization of prototypical bricks of life can strongly benefit from the integration of high resolution spectroscopy and quantum mechanical computations. We have selected a number of representative amino acids (glycine, alanine, serine, cysteine, threonine, aspartic acid and asparagine) to validate a new computational setup rooted in quantum-chemical computations of increasing accuracy guided by machine learning tools. Together with low-lying energy minima, the barriers ruling their interconversion are evaluated in order to unravel possible fast relaxation paths. Vibrational and thermal effects are also included in order to estimate relative free energies at the temperature of interest in the experiment. The spectroscopic parameters of all the most stable conformers predicted by this computational strategy, which do not have low-energy relaxation paths available, closely match those of the species detected in microwave experiments. Together with their intrinsic interest, these accurate results represent ideal benchmarks for more approximate methods.
The chirality controlled conformational landscape of the trimer of propylene oxide (PO), a prototypical chiral molecule, was investigated using rotational spectroscopy and a range of theoretical tools for conformational searches and for evaluating vibrational contributions to effective structures. Two sets of homochiral (PO)3 rotational transitions were assigned and the associated conformers identified with theoretical support. One set of heterochiral (PO)3 transitions was assigned, but no structures generated by one of the latest, advanced conformational search codes could account for them. With the aid of a Python program, the carbon atom backbone and then the heterochiral (PO)3 structure were generated using 13C isotopic data. Excellent agreement between theoretical and experimental rotational constants and relative dipole moment components of all three conformers was achieved, especially after applying vibrational corrections to the rotational constants.
The infrared (IR)
and vibrational circular dichroism (VCD) spectra
of 2,3-butanediol and
trans
-1,2-cyclohexanediol from
900 to 7500 cm
–1
(including mid-IR, fundamental
CH and OH stretchings, and near-infrared regions) have been investigated
by a combined experimental and computational strategy. The computational
approach is rooted in density functional theory (DFT) computations
of harmonic and leading anharmonic mechanical, electrical, and magnetic
contributions, followed by a generalized second-order perturbative
(GVPT2) evaluation of frequencies and intensities for all the above
regions without introducing any ad hoc scaling factor. After proper
characterization of large-amplitude motions, all resonances plaguing
frequencies and intensities are taken into proper account. Comparison
of experimental and simulated spectra allows unbiased assignment and
interpretation of the most interesting features. The reliability of
the GVPT2 approach for OH stretching fundamentals and overtones is
confirmed by the remarkable agreement with a local mode model purposely
tailored for the latter two regions. Together with the specific interest
of the studied molecules, our results confirm that an unbiased assignment
and interpretation of vibrational spectra for flexible medium-size
molecules can be achieved by means of a nearly unsupervised reliable,
robust, and user-friendly DFT/GVPT2 model.
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