The Pladias (Plant Diversity Analysis and Synthesis) Database of the Czech Flora and Vegetation was developed by the Pladias project team in 2014-2018 and has been continuously updated since then. The flora section of the database contains critically revised information on the Czech vascular flora, including 13.6 million plant occurrence records, which are dynamically displayed in maps, and data on 120 plant characteristics (traits, environmental associations and other information), divided into the sections: (1) Habitus and growth type, (2) Leaf, (3) Flower, (4) Fruit, seed and dispersal, (5) Belowground organs and clonality, (6) Trophic mode, (7) Karyology, (8) Taxon origin, (9) Ecological indicator values, (10) Habitat and sociology, (11) Distribution and frequency, and (12) Threats and protection. The vegetation section of the database contains information on Czech vegetation types extracted from the monograph Vegetation of the Czech Republic. The data are supplemented by national botanical bibliographies, electronic versions of the standard national flora and vegetation monographs, a database of more than 19,000 pictures of plant taxa and vegetation types, and digital maps (shapefiles) with botanical information. The data from the database are available online on a public portal www.pladias.cz, which also provides download options for various datasets and online identification keys to the species and vegetation types of the Czech Republic. In this paper, we describe the general scope, structure and content of the database, and details of the data on plant characteristics. To illustrate the data and describe the main geographic patterns in selected plant characteristics, we provide maps of mean values of numerical characteristics or proportions of categories for categorical characteristics on the map of the country in a grid of 5 longitudinal × 3 latitudinal minutes (approximately 6.0 km × 5.5 km). We also summarize the main variation patterns in the functional traits in the Czech flora using the principal component analysis.

Aim Many high-latitude floras contain more calcicole than calcifuge vascular plant species. The species pool hypothesis explains this pattern through an historical abundance of high-pH soils in the Pleistocene and an associated opportunity for the evolutionary accumulation of calcicoles. To obtain insights into the history of calcicole/calcifuge patterns, we studied species richness-pH-climate relationships across a climatic gradient, which included cool and dry landscapes resembling the Pleistocene environments of northern Eurasia. Location Western Sayan Mountains, southern Siberia.Methods Vegetation and environmental variables were sampled at steppe, forest and tundra sites varying in climate and soil pH, which ranged from 3.7 to 8.6. Species richness was related to pH and other variables using linear models and regression trees.Results Species richness is higher in areas with warmer winters and at medium altitudes that are warmer than the mountains and wetter than the lowlands. In treeless vegetation, the species richness-pH relationship is unimodal. In tundra vegetation, which occurs on low-pH soils, richness increases with pH, but it decreases in steppes, which have high-pH soils. In forests, where soils are more acidic than in the open landscape, the species richness-pH relationship is monotonic positive. Most species occur on soils with a pH of 6-7.Main conclusions Soil pH in continental southern Siberia is strongly negatively correlated with precipitation, and species richness is determined by the opposite effects of these two variables. Species richness increases with pH until the soil is very dry. In dry soils, pH is high but species richness decreases due to drought stress. Thus, the species richness-pH relationship is unimodal in treeless vegetation. Trees do not grow on the driest soils, which results in a positive species richness-pH relationship in forests. If modern species richness resulted mainly from the species pool effects, it would suggest that historically common habitats had moderate precipitation and slightly acidic to neutral soils.

Aim:The former continental-scale studies modelled coarse-grained plant speciesrichness patterns (gamma diversity). Here we aim to refine this information for European forests by (a) modelling the number of vascular plant species that co-occur in local communities (alpha diversity) within spatial units of 400 m 2 ; and (b) assessing the factors likely determining the observed spatial patterns in alpha diversity.Location: Europe roughly within 12°W-30°E and 35-60°N.Taxon: Vascular plants. Methods:The numbers of co-occurring vascular plant species were counted in 73,134 georeferenced vegetation plots. Each plot was classified by an expert system into deciduous broadleaf, coniferous or sclerophyllous forest. Random Forest models were used to map and explain spatial patterns in alpha diversity for each forest type separately using 19 environmental, land-use and historical variables.Results: Our models explained from 51.0% to 70.9% of the variation in forest alpha diversity. The modelled alpha-diversity pattern was dominated by a marked gradient from species-poor north-western to species-rich south-eastern Europe. The most prominent richness hotspots were identified in the Calcareous Alps and adjacent north-western Dinarides, the Carpathian foothills in Romania and the Western Carpathians in Slovakia. Energy-related factors, bedrock types and terrain ruggedness were identified as the main variables underlying the observed richness patterns. Alpha diversity increases especially with temperature seasonality in deciduous broadleaf forests, on limestone bedrock in coniferous forests and in areas with low annual actual evapotranspiration in sclerophyllous forests. Main conclusions:We provide the first predictive maps and analyses of environmental factors driving the alpha diversity of vascular plants across European forests. Such information is important for the general understanding of European biodiversity. This study also demonstrates a high potential of vegetation-plot databases as sources for robust estimation of the number of vascular plant species that co-occur at fine spatial grains across large areas.

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Nine vegetation types were distinguished using cluster analysis within Molinion meadows in Slovakia. Vegetation of cluster 1 occurs on most acidic soils and is characterized by the occurrence of species of the Caricion fuscae alliance and of the Nardus grasslands. Vegetation of cluster 2 is also found on rather acidic soils but in contrast to cluster 1 vegetation it contains species of base-rich sites, such as Betonica officinalis, Galium boreale or Serratula tinctoria. Vegetation of cluster 3 occurs in wet base-rich habitats and often contains species of the Caricion davallianae alliance. Species of dry and Nardus grasslands are typical for vegetation of cluster 4, which is found at the driest sites and is confined to oligotrophic sandy soils. Vegetation of clusters 5 and 6 occurs on moist mesotrophic soils. Their species composition is quite similar, the main difference being that the former includes species-poor relevés and the latter includes species-rich relevés. Relevés of cluster 7 include species of dry grasslands and some ruderal species and represent degraded types of inundated floodplain meadows of the Deschampsion alliance. Vegetation of clusters 8 is characterized by species of the Phragmito-Magnocaricetea class and of the Deschampsion alliance, and occurs in wet nutrient-rich habitats. Vegetation of cluster 9, which usually develops from vegetation of cluster 8 due to decrease in the ground-water table, often contains species of dry grasslands and mesic meadows. Except for relevés of clusters 1 and 7, all others can be assigned to the Molinietum caeruleae Koch 1926 association. Cluster 1 corresponds to the Junco effusi-Molinietum caeruleae Tüxen 1954 association. Average Ellenberg indicator values for relevés, which were passively projected on the ordination biplot of detrended correspondence analysis, showed that the first ordination axis correlates with nutrients, soil base status and temperature, and second axis with moisture.

WetVegEurope is a research project (http://www.sci.muni.cz/botany/vegsci/wetveg) whose goal is to provide a synthesized formalized classification of the aquatic and marsh vegetation across Europe at the level of phytosociological associations. In order to achieve the project objective, a WetVegEurope database has been created (GIVD ID: EU-00-020, http://www.givd.info/ID/EU-00-020), which currently contains 375,212 vegetation plots of aquatic, marsh and wet vegetation types from 33 European countries. The WetVegEurope database includes datasets from pre-existing national and thematic databases and also 10,616 plots previously not digitalized or even unpublished. This database offers an extensive source of data for future studies on aquatic and marsh plant species and vegetation types at the European scale.

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Digitising and aggregating local floristic data is a critical step in the study of biodiversity. The integrative web-based platform Pladias, designed to cover a wide range of data on vascular plants, was recently developed in the Czech Republic. The combination of occurrence data with species characteristics opens many opportunities for data analysis and synthesis. This article describes the relational structure of the Pladias database service (PladiasDB) and the context of the platform architecture. The structure is relatively complex, as our goal was to cover: (i) species occurrence records, including their management, validation and export of revised species distribution maps, (ii) data on species characteristics with quality control tools using defined data types and (iii) separate user interfaces (UI) for professionals and the general public. We discuss the approaches chosen to model individual elements in PladiasDB and summarise the experience gained during the first five years of operation of the Pladias platform.