Aim:The main aims were to determine: (a) the relative contribution of species replacement and richness difference from components to overall taxonomic (TDβ) and functional (FDβ) beta diversity of spider communities; (b) the degree to which TDβ and FDβ components can be explained by the environmental or geographic predictors; (c) whether FDβ components were lower than expected given the underlying TDβ variation. Location:This study was carried out in 22 oak forest sites across the Iberian Peninsula. The area comprises two biogeographic regions, Eurosiberian (North) andMediterranean (Centre and South).Methods: Spiders were sampled using a standardized protocol. A species x traits matrix was constructed. Total taxonomic (TDβ total ) and total functional (FDβ total ) beta diversity were calculated, by pairwise comparisons, and partitioned into their replacement (β repl ) and richness difference (β rich ) components. Mantel tests were used to relate taxonomic and functional dissimilarity with environmental and geographic distances. A spatial eigenfunction model was constructed and the variation in TDβ and FDβ explained by environment and geographic predictors was quantified. Null models were used to test if FDβ was higher or lower than expected given TDβ.Results: β repl was the dominant component contributing to 84.2% and 72.8% for TDβ total and FDβ total , respectively. TDβ total and FDβ total (and their replacement components) were higher between-than within-biogeographic regions. TDβ total and TDβ repl were positively correlated with environmental and geographic distances, even when controlling for a biogeographic effect, but their functional counterparts were only correlated with environmental distance. Variation partitioning showed that pure environmental and spatially structured environmental effects had a small contribution to beta diversity, except for TDβ rich . The observed slopes of the regressions of FDβ total and FDβ repl in relation to environmental distance were slower than the null model expectations.Main Conclusions: Spider assemblage variation was mainly determined by the replacement, and not the net loss, of species and traits. TDβ was influenced by niche | 289 CARVALHO et AL.
Spiders are a highly diversified group of arthropods and play an important role in terrestrial ecosystems as ubiquitous predators, which makes them a suitable group to test a variety of eco-evolutionary hypotheses. For this purpose, knowledge of a diverse range of species traits is required. Until now, data on spider traits have been scattered across thousands of publications produced for over two centuries and written in diverse languages. To facilitate access to such data, we developed an online database for archiving and accessing spider traits at a global scale. The database has been designed to accommodate a great variety of traits (e.g. ecological, behavioural and morphological) measured at individual, species or higher taxonomic levels. Records are accompanied by extensive metadata (e.g. location and method). The database is curated by an expert team, regularly updated and open to any user. A future goal of the growing database is to include all published and unpublished data on spider traits provided by experts worldwide and to facilitate broad cross-taxon assays in functional ecology and comparative biology. Database URL: https://spidertraits.sci.muni.cz/
BackgroundA large scale semi-quantitative biodiversity assessment was conducted in white oak woodlands in areas included in the Spanish Network of National Parks, as part of a project aimed at revealing biogeographic patterns and identify biodiversity drivers. The semi-quantitative COBRA sampling protocol was conducted in sixteen 1-ha plots across six national parks using a nested design. All adult specimens were identified to species level based on morphology. Uncertain delimitations and identifications due to either limited information of diagnostic characters or conflicting taxonomy were further investigated using DNA barcode information.New informationWe identified 376 species belonging to 190 genera in 39 families, from the 8,521 adults found amongst the 20,539 collected specimens. Faunistic results include the discovery of 7 new species to the Iberian Peninsula, 3 new species to Spain and 11 putative new species to science. As largely expected by environmental features, the southern parks showed a higher proportion of Iberian and Mediterranean species than the northern parks, where the Palearctic elements were largely dominant. The analysis of approximately 3,200 DNA barcodes generated in the present study, corroborated and provided finer resolution to the morphologically based delimitation and identification of specimens in some taxonomically challenging families. Specifically, molecular data confirmed putative new species with diagnosable morphology, identified overlooked lineages that may constitute new species, confirmed assignment of specimens of unknown sexes to species and identified cases of misidentifications and phenotypic polymorphisms.
There is an increasing demand for databases including species trait information for biodiversity and community ecology studies. The existence of trait databases is useful for comparative studies within taxa or geographical regions, but there is low availability of databases for certain organisms. Here we present an open access functional trait database for spiders from Macaronesia and the Iberian Peninsula, recording several morphological and ecological traits related to the species life histories, microhabitat and trophic preferences. We present a database that includes 12 biological traits for 506 spider species present in natural forests of the Iberian Peninsula (Spain) and three Macaronesian archipelagoes (Azores, Madeira and Canary Islands). The functional trait database consists of two sections: individual-level data for six morphological traits (total body size, prosoma length, prosoma width, prosoma height, tibia I length and fang length), based on direct measurements of 2844 specimens of all spider species; and species-level aggregate data for 12 traits (same 6 morphological traits as in the previous section plus dispersal ability, vertical stratification, circadian activity, foraging strategy, trophic specialization and colonization status), based on either the average of the direct measurements or bibliographic searches. individual-level data for six morphological traits (total body size, prosoma length, prosoma width, prosoma height, tibia I length and fang length), based on direct measurements of 2844 specimens of all spider species; and species-level aggregate data for 12 traits (same 6 morphological traits as in the previous section plus dispersal ability, vertical stratification, circadian activity, foraging strategy, trophic specialization and colonization status), based on either the average of the direct measurements or bibliographic searches. This functional trait database will serve as a data standard for currently ongoing analyses that require trait and functional diversity statistics.
Phylogenetic relatedness is a key diversity measure for the analysis and understanding of how species and communities evolve across time and space. Understanding the nonrandom loss of species with respect to phylogeny is also essential for better-informed conservation decisions. However, several factors are known to influence phylogenetic reconstruction and, ultimately, phylogenetic diversity metrics. In this study, we empirically tested how some of these factors (topological constraint, taxon sampling, genetic markers and calibration) affect phylogenetic resolution and uncertainty. We built a densely sampled, species-level phylogenetic tree for spiders, combining Sanger sequencing of species from local communities of two biogeographical regions (Iberian Peninsula and Macaronesia) with a taxon-rich backbone matrix of Genbank sequences and a topological constraint derived from recent phylogenomic studies. The resulting tree constitutes the most complete spider phylogeny to date, both in terms of terminals and background information, and may serve as a standard reference for the analysis of phylogenetic diversity patterns at the community level. We then used this tree to investigate how partial data affect phylogenetic reconstruction, phylogenetic diversity estimates and their rankings, and, ultimately, the ecological processes inferred for each community. We found that the incorporation of a single slowly evolving marker (28S) to the DNA barcode sequences from local communities, had the highest impact on tree topology, closely followed by the use of a backbone matrix. The increase in missing data resulting from combining partial sequences from local communities only had a moderate impact on the resulting trees, similar to the difference observed when using topological constraints. Our study further revealed substantial differences in both the phylogenetic structure and diversity rankings of the analyzed communities estimated from the different phylogenetic treatments, especially when using non-ultrametric trees (phylograms) instead of time-stamped trees (chronograms). Finally, we provide some recommendations on reconstructing phylogenetic trees to infer phylogenetic diversity within ecological studies.
The incorporation of molecular data into current taxonomic practise has unravelled instances of incongruence among different data sets. Here we report a case of mitochondrial discordance in cobweb spiders of the genus Theridion Walckenaer, 1805 from the Iberian Peninsula. Morphological examination of samples from a country-wide bioinventory initiative revealed the existence of a putative new species and two nominal species belonging to the Theridion melanurum species group. The morphological delineation was supported by the molecular analysis of a nuclear marker but was at odds with the groups circumscribed by a mitochondrial marker. The causes of this discordance remained uncertain, once sample and sequencing errors and the existence of pseudogenes were discarded. The full sorting observed in the alleles of the more slowly evolving nuclear marker ruled out incomplete lineage sorting, while the geographic patterns recovered were difficult to reconciliate with ongoing hybridization. We propose that the apparent incongruence observed is most likely the result of old introgression events in a group with high dispersal abilities. We further speculate that endosymbiont-driven cytoplasmatic incompatibility could be involved in the fixation of mitochondrial haplotypes across species barriers. Additionally, we describe the new species T. promiscuumsp. nov., based on the presence of diagnostic morphological traits, backed up by the nuclear data delimitation. Our study contributes yet another example of the perils of relying on single methods or data sources to summarise the variation generated by multiple processes acting through thousands of years of evolution and supports the key role of biological inventories in improving our knowledge of invertebrate biodiversity.
1. The current rate of species loss calls for immediate actions to preserve biodiversity and ecosystem functioning. Cataloguing species richness and composition, and revealing how diversity is geographically distributed are the first steps towards designing efficient conservation strategies.2. Here, we aim to determine diversity patterns and potential drivers of taxonomic and genetic diversity and population structure of Iberian spiders. We used a community level perspective, analysing more than 3000 DNA barcode sequences representing $370 spider species dwelling in white-oak forest habitats across the Spanish National Park network.3. By combining and comparing morphological and DNA barcode-based species delimitation methods, we assessed their performance and identified putative factors behind cases of incongruence. Our findings uncovered potential overlooked diversity as suggested by the geographic patterns of genetic variation and put a red flag on those taxa that may be undergoing overlooked evolutionary or ecological processes.4. Spider functional traits associated with foraging strategy, microhabitat preference, ballooning ability and circadian activity explained the observed patterns of population structure across species but did not explain variation in genetic diversity. Overall, our study represents a major step forward in the understanding of large-scale diversity patterns in Iberian spiders at the community level and provides relevant information to guide future conservation strategies of the so-far largely overlooked invertebrate diversity.
Background There is a pressing need for scalable healthcare solutions and a shift in the rehabilitation paradigm from hospitals to homes to tackle the increase in stroke incidence while reducing the practical and economic burden for patients, hospitals, and society. Digital health technologies can contribute to addressing this challenge; however, little is known about their effectiveness in at-home settings. In response, we have designed the RGS@home study to investigate the effectiveness, acceptance, and cost of a deep tech solution called the Rehabilitation Gaming System (RGS). RGS is a cloud-based system for delivering AI-enhanced rehabilitation using virtual reality, motion capture, and wearables that can be used in the hospital and at home. The core principles of the brain theory-based RGS intervention are to deliver rehabilitation exercises in the form of embodied, goal-oriented, and task-specific action. Methods The RGS@home study is a randomized longitudinal clinical trial designed to assess whether the combination of the RGS intervention with standard care is superior to standard care alone for the functional recovery of stroke patients at the hospital and at home. The study is conducted in collaboration with hospitals in Spain, Sweden, and France and includes inpatients and outpatients at subacute and chronic stages post-stroke. The intervention duration is 3 months with assessment at baseline and after 3, 6, and 12 months. The impact of RGS is evaluated in terms of quality of life measurements, usability, and acceptance using standardized clinical scales, together with health economic analysis. So far, one-third of the patients expected to participate in the study have been recruited (N = 90, mean age 60, days after stroke ≥ 30 days). The trial will end in July 2023. Discussion We predict an improvement in the patients’ recovery, high acceptance, and reduced costs due to a soft landing from the clinic to home rehabilitation. In addition, the data provided will allow us to assess whether the prescription of therapy at home can counteract deterioration and improve quality of life while also identifying new standards for online and remote assessment, diagnostics, and intervention across European hospitals. Trial registration ClinicalTrials.gov NCT04620707. Registered on November 3, 2020
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