Environmental reservoirs of antibiotic resistance are important to human health, and recent evidence indicates that terrestrial resistance reservoirs have expanded during the antibiotic era. Our aim was to study the impact of Cu pollution as a selective driver for the spread of antibiotic resistance in soil. Bacteria were extracted from a well-characterized soil site solely contaminated with CuSO₄ more than 80 years ago and from a corresponding control soil. Pollution-induced bacterial community tolerance (PICT) to Cu and a panel of antibiotics was determined by a novel cultivation-independent approach based on [³H]bromodeoxyuridine (BrdU) incorporation into DNA and by resistance profiling of soil bacterial isolates on solid media. High Cu exposure selected for Cu-tolerant bacterial communities but also coselected for increased community-level tolerance to tetracycline and vancomycin. Cu-resistant isolates showed significantly higher incidence of resistance to five out of seven tested antibiotics (tetracycline, olaquindox, nalidixic acid, chloramphenicol, and ampicillin) than Cu-sensitive isolates. Our BrdU-PICT data demonstrate for the first time that soil Cu exposure coselects for resistance to clinically important antibiotics (e.g., vancomycin) at the bacterial community-level. Our study further indicates that Cu exposure provides a strong selection pressure for the expansion of the soil bacterial resistome.
Kelp and other seaweeds are traditionally used in many parts of the world as a soil amendment on arable fields. Seaweeds contain biochemical compounds that can act as plant growth regulators in terrestrial plants. In a lowintensity arable grassland in northwest Scotland an organic fertilizer, kelp (Laminaria digitata) has been used for hundreds of years, due to its anticipated positive effect as a soil conditioner and provider of plant nutrients. In this study the effects of kelp on germination and rooting of crops and native plants from this area were investigated in soil-free media. Germination was studied by incubation in the presence of kelp solutions. Rooting of plant cuttings was assessed after a pulse treatment with kelp solutions, and indole-3 acetic acid (IAA) as a reference plant growth regulator. Germination percentage of Plantago lanceolata, Trifolium repens and Avena strigosa seeds increased significantly when incubated with 0.05% kelp solutions. Total root weight and the individual weight of roots produced in cuttings of Vigna radiata and P. lanceolata were significantly increased when exposed to a 0.5% solution of kelp. Plant vigour, assessed visually, decreased significantly for P. lanceolata exposed to kelp at concentrations of 0.5 and 5.0% indicating the presence of a threshold level for an inhibitory effect of kelp at these concentrations, which may be due to high salinity. The results confirmed the presence of plant growth regulators in kelp, and indicates that amendment with kelp may potentially affect plant community composition. The threshold levels where some plants responded negatively to kelp amendment were close to or lower than the theoretical concentrations of kelp in soil water at field conditions with the current doses used on the machair, indicating that care should be taken in either administering kelp at the appropriate dose or leaching out salt before application.
Marginal coastal soils are dependent on appropriate land management to prevent soil erosion, as a result of low soil stability combined with exposure to strong winds. An example of such an area is the machair, a fixed dune system utilized for agriculture in the northwest of Scotland, UK. The separate and combined effects of synthetic NPK fertilizer and a traditional soil conditioner (kelp, a seaweed) on soil structure formation, stabilization and biological parameters were studied on a cropped field on the machair. Soil physical properties examined included water retention at 10 kPa matric suction, water stable aggregates (WSA) >1 mm, aggregate stability, and biological properties including ester‐linked fatty acid (ELFA) analysis and β‐glucosidase activity for microbial biomass and activity, respectively. Significant treatment effects were few and inconsistent between sampling times, but included kelp and/or NPK fertilizer reducing aggregation, water retention, microbial biomass and activity relative to the unamended control treatment. Furthermore, seasonal variation, which could be attributed to changes in soil water content, was stronger than variation in response to fertilizer treatments. Principal components analysis of the ELFA data showed that ploughing promoted fungal biomass relative to bacteria, and confirmed both the absence of consistent synthetic and organic fertilizer effects and the sensitivity of microbial biomass to season. Overall, the study demonstrated the resilience of a calcareous sandy soil to amendment with fertilizer.
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