The Neuquén-Criollo goat is a significant genetic resource, adapted to the singular harsh environment of North Patagonia. Its present gene pool was built up from different breeds since the Spanish colonization being Angora the latest introduced. High phenotypic diversity and their geographical distribution suggest a subdivision of this goat population into four close sub-areas. As phenotypic characterization was carried out on 827 Criollo adult goats. Analyse were based on fourteen quantitative (morphostructural) and eight qualitative (morphological) variables. Correspondence analyses for qualitative and canonical discriminant analysis for quantitative traits were performed, using hair types as classification variable. Results were consistent in differentiating the four considered sub-areas. Neuquen Criollo breed could be characterized in two ecotypes: Short and Long hair goats, a mixed type area and a crossbred area fulfil the types distribution. Principal divergence factors would be isolation, natural and artificial selection, transhumance and exotic breeds introduction. ZusammenfassungTitel der Arbeit: Phänotypische Differenzierung bei Exterieurmerkmalen der lokalen Criollo Ziegenpopulation in Patagonien (Argentinien) Die Neuquen-Criollo Ziege ist eine bedeutende genetische Ressource, die angepasst ist an die harten Umweltbedingungen Nord-Patagoniens. Der aktuelle Genpool ist seit der spanischen Kolonisierung von verschiedenen Rassen gebildet worden, wobei die Angora-Rasse die letzte eingeführte Rasse war. Phänotypische Diversität und geographische Verteilung lassen eine Differenzierung der Population in vier angrenzenden Gebieten vermuten. Eine phänotypische Charakterisierung von 827 ausgewachsenen Criollo Ziegen wurde durchgeführt. Vierzehn quantitative (morphostrukturale) und acht qualitative (morphologische) Merkmale wurden analysiert. Deskriptive Statistik, Korrespondence-Analyse für qualitative und Diskriminant-Analyse, für quantitative Variable wurden mit dem "Deckhaartyp" als Klassen-Merkmal ausgeführt. Die Ergebnisse stimmen mit der vermuteten Differenzierung in vier Gebieten überein. Die Neuquen-Criollo Ziege konnte in zwei Ecotypen: kurz-und langhaarig, charakterisiert werden. Gebiete mit gemischten Typen und mit Angora gekreuzten Typen wurden identifiziert. Die wichtigsten Differenzierungsfaktoren sind Isolierung, natürliche und künstliche Selektion, Transhumanz und Einführung von exotischen Rassen.

Biodiversity studies are more efficient when large numbers of breeds belonging to several countries are involved, as they allow for an in-depth analysis of the within- and between-breed components of genetic diversity. A set of 21 microsatellites was used to investigate the genetic composition of 24 Creole goat breeds (910 animals) from 10 countries to estimate levels of genetic variability, infer population structure and understand genetic relationships among populations across the American continent. Three commercial transboundary breeds were included in the analyses to investigate admixture with Creole goats. Overall, the genetic diversity of Creole populations (mean number of alleles = 5.82 ± 1.14, observed heterozygosity = 0.585 ± 0.074) was moderate and slightly lower than what was detected in other studies with breeds from other regions. The Bayesian clustering analysis without prior information on source populations identified 22 breed clusters. Three groups comprised more than one population, namely from Brazil (Azul and Graúna; Moxotó and Repartida) and Argentina (Long and shorthair Chilluda, Pampeana Colorada and Angora-type goat). Substructure was found in Criolla Paraguaya. When prior information on sample origin was considered, 92% of the individuals were assigned to the source population (threshold q ≥ 0.700). Creole breeds are well-differentiated entities (mean coefficient of genetic differentiation = 0.111 ± 0.048, with the exception of isolated island populations). Dilution from admixture with commercial transboundary breeds appears to be negligible. Significant levels of inbreeding were detected (inbreeding coefficient > 0 in most Creole goat populations, P < 0.05). Our results provide a broad perspective on the extant genetic diversity of Creole goats, however further studies are needed to understand whether the observed geographical patterns of population structure may reflect the mode of goat colonization in the Americas.

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Goats have played a key role as source of nourishment for humans in their expansion all over the world in long land and sea trips. This has guaranteed a place for this species in the important and rapid episode of livestock expansion triggered by Columbus' arrival in the Americas in the late 1400s. The aims of this study are to provide a comprehensive perspective on genetic diversity in American goat populations and to assess their origins and evolutionary trajectories. This was achieved by combining data from autosomal neutral genetic markers obtained in more than two thousand samples that encompass a wide range of Iberian, African and Creole goat breeds. In general, even though Creole populations differ clearly from each other, they lack a strong geographical pattern of differentiation, such that populations of different admixed ancestry share relatively close locations throughout the large geographical range included in this study. Important Iberian signatures were detected in most Creole populations studied, and many of them, particularly the Cuban Creole, also revealed an important contribution of African breeds. On the other hand, the Brazilian breeds showed a particular genetic structure and were clearly separated from the other Creole populations, with some influence from Cape Verde goats. These results provide a comprehensive characterisation of the present structure of goat genetic diversity, and a dissection of the Iberian and African influences that gave origin to different Creole caprine breeds, disentangling an important part of their evolutionary history. Creole breeds constitute an important reservoir of genetic diversity that justifies the development of appropriate management systems aimed at improving performance without loss of genomic diversity.

Western hemisphere goats have European, African and Central Asian origins, and some local or rare breeds are reported to be adapted to their environments and economically important. By-in-large these genetic resources have not been quantified. Using 50 K SNP genotypes of 244 animals from 12 goat populations in United States, Costa Rica, Brazil and Argentina, we evaluated the genetic diversity, population structure and selective sweeps documenting goat migration to the “New World”. Our findings suggest the concept of breed, particularly among “locally adapted” breeds, is not a meaningful way to characterize goat populations. The USA Spanish goats were found to be an important genetic reservoir, sharing genomic composition with the wild ancestor and with specialized breeds (e.g. Angora, Lamancha and Saanen). Results suggest goats in the Americas have substantial genetic diversity to use in selection and promote environmental adaptation or product driven specialization. These findings highlight the importance of maintaining goat conservation programs and suggest an awaiting reservoir of genetic diversity for breeding and research while simultaneously discarding concerns about breed designations.