A number of Alternaria spp. have been isolated from potato worldwide but only Alternaria solani and A. alternata have been described as pathogenic to this host in the United States. These taxa are easily differentiated based on conidial morphology but species delimitation among the small-spored Alternaria spp. associated with potato are much more challenging. Accurate identification methods for small-spored Alternaria spp. are necessary so that a more thorough understanding of Alternaria epidemiology can be obtained. Isolations of Alternaria fungi from lesions on potato leaves collected in the U.S. Northwest were made between 2008 and 2011. Large-spored taxa (putatively A. solani), were isolated less frequently than small-spored taxa (putatively A. alternata sensu lato), except in 2010. Colletotrichum coccodes was isolated from necrotic lesions in 2008 to 2010 but not in 2011. Frequency of isolation ranged from 0.05 (5%) to 0.11 (11%) during the 3 years the fungus was detected. Anonymous genomic region OPA1-3, previously used for Alternaria systematics, allowed for the discrimination of phylogenetic lineages among 210 small-spored isolates. When OPA1-3 was restricted using enzyme ApaI, 65 isolates (31%) displayed a restriction banding pattern consistent with previously characterized morphospecies A. alternata and A. tenuissima and 145 (69%) displayed a restriction banding pattern consistent with the previously characterized morphospecies A. arborescens. Morphological characterization of a subsample of 59 small-spored Alternaria isolates randomly selected with each restriction pattern was compared with phylogenetic lineage. In all, 54 (92%) isolates were consistently assigned to the same group by both methods. Three isolates exhibited conidial morphologies that were inconsistent with any described morphospecies. A small number of isolates were identified as A. arbusti (infectoria group) via sequencing of the glyceraldehyde-3-phosphate-dehydrogenase locus and BLAST searches.
Alternaria spp. were collected from potato foliage showing symptoms of early blight and brown spot in the Columbia Basin, WA and Bonners Ferry and Rupert, ID between 2009 and 2011. The aggressiveness of three Alternaria spp. on potato was quantified on nonwounded and wounded detached leaves of ‘Russet Norkotah’ potato; wounded detached leaves of ‘Alturas’, ‘Ranger Russet’, ‘Russet Burbank’, and ‘Umatilla Russet’; and whole plants of Russet Norkotah. Mean infection frequencies (MIF) and area under the lesion expansion curve (AULEC) were significantly greater for Alternaria solani (P = 0.0072 and 0.0002, respectively) than for A. arborescens or A. arbusti on nonwounded leaves. Wounding of tissue significantly increased MIF and AULEC for A. arbusti (P = 0.008 and 0.0047, respectively) and AULEC for A. arborescens (P = 0.01) relative to nonwounded tissue. AULEC did not differ significantly among the three Alternaria spp. when inoculated onto wounded foliage of whole plants (P = 0.34); the AULEC of whole plants was positively and significantly correlated with AULEC on detached leaves (P = 0.03). Umatilla Russet was the most susceptible and Russet Burbank was the least susceptible based on MIF and AULEC for all three pathogen species. Results indicate that A. solani was the more aggressive pathogen of potato in the Columbia Basin, because both A. arborescens and A. arbusti require wounds and A. arbusti lesions do not expand significantly in comparison with A. solani or A. arborescens following inoculation.
Grafting is used in watermelon [Citrullus lanatus (Thunb.) Matsum and Nakai] production as a means to combat soilborne diseases. To support the development of new rootstock cultivars in the United States, we screened cucurbit germplasm accessions for resistance to verticillium wilt (caused by Verticillium dahliae Kleb.) and for compatibility as watermelon rootstocks. Screening was done using a field naturally infested with V. dahliae [5 and 7.5 colony-forming units (cfu)·g−1 soil in 2017 and 2018, respectively], and plants were inoculated at transplanting (1.5 and 104 cfu of V. dahliae per plant in 2017 and 2018, respectively). In 2017, 56 germplasm accessions from three genera commonly used as rootstocks, Cucurbita, Lagenaria, and Benincasa, were sourced from the U.S. Department of Agriculture (USDA) National Plant Germplasm System and area under the verticillium wilt (disease) progress curve (AUDPC) values ranged from 16 to 397. The 14 accessions with the lowest AUDPC values and good germination (>40%) were used as rootstocks along with the commercial rootstock cv. Tetsukabuto (control), and all were grafted with watermelon cv. Secretariat as the scion in 2018. Grafted plant survival rate was greatest for ‘Tetsukabuto’ (90%) and the accession PI 381840 (L. siceraria) (89%), and ranged from 22% to 85% for all other accessions. All grafted treatments that produced mature fruit in 2018 tended to flower at the same time as nongrafted ‘Secretariat’, with first male and female flowers occurring in 45 to 50 days and 44 to 51 days after transplanting, respectively. There were no significant differences in AUDPC values due to grafting or when accessions were compared with ‘Tetsukabuto’. Only six accessions produced mature fruit when grafted with ‘Secretariat’, indicating they were compatible for watermelon grafting. Fruit weight and number as well as total soluble solids, pH, lycopene content, rind firmness and thickness, and dry matter content were similar for all accessions and ‘Tetsukabuto’ grafted on ‘Secretariat’. Only fruit flesh firmness differed and was highest for ‘Secretariat’ grafted on ‘PI 491316’ and lowest for ‘Secretariat’ grafted on ‘PI 49174’. The six verticillium wilt-tolerant accessions that were compatible with watermelon could potentially be used as rootstocks or as sources of genetic resistance in rootstock breeding programs.
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