Ecology is often said to lack general theories sufficiently predictive for applications. Here, we examine the concept of a periodic table of niches and feasibility of niche classification schemes from functional trait and performance data. Niche differences and their influence on ecological patterns and processes could be revealed effectively by first performing data reduction/ordination analyses separately on matrices of trait and performance data compiled according to logical associations with five basic niche ‘dimensions’, or aspects: habitat, life history, trophic, defence and metabolic. Resultant patterns then are integrated to produce interpretable niche gradients, ordinations and classifications. Degree of scheme periodicity would depend on degrees of niche conservatism and convergence causing species clustering across multiple niche dimensions. We analysed a sample data set containing trait and performance data to contrast two approaches for producing niche schemes: species ordination within niche gradient space, and niche categorisation according to trait‐value thresholds. Creation of niche schemes useful for advancing ecological knowledge and its applications will depend on research that produces functional trait and performance datasets directly related to niche dimensions along with criteria for data standardisation and quality. As larger databases are compiled, opportunities will emerge to explore new methods for data reduction, ordination and classification.

The Amazon rainforest has experienced rapid land-use changes over the last few decades, including extensive deforestation that can affect riparian habitats and streams. The aim of this study was to assess responses of stream fish assemblages to deforestation and land cover change in the eastern Amazon. We expected that percentage of forest in the catchment is correlated with local habitat complexity, which in turn determines fish assemblage composition and structure. We sampled 71 streams in areas with different land uses and tested for relationships between stream fish assemblages and local habitat and landscape variables while controlling for the effect of inter site distance. Fish assemblage composition and structure were correlated with forest coverage, but local habitat variables explained more of the variation in both assemblage composition and structure than landscape variables.Inter site distance contributed to variance explained by local habitat and landscape variables, and the percentage of variance explained by the unique contribution of local habitat was approximately equivalent to the shared variance explained by all three factors in the model. In these streams of the eastern Amazon, fish assemblages were most strongly influenced by features of instream and riparian habitats, yet indirect effects of deforestation on fish assemblage composition and structure were observed even though intact riparian zones were present at most sites. Long-term monitoring of the hydrographic basin, instream habitat and aquatic fauna is needed to test for potential legacy effects and time lags, as well as assess species responses to continuing deforestation and land-use changes in the Amazon. Aperfeiçoamento de Pessoal de Nível Superior (CAPES) for PROCAD/ CAPES funding (project no 88881.068425/2014-01), the graduate scholarship for TOB and senior internship scholarship for LFAM to conduct research at Texas A&M University (process 88881.119097/2016-1). The manuscript was improved during the review process by addressing the thoughtful comments from Philip Kaufmann and an anonymous reviewer.

Species that pass through similar environmental filters, regardless of geographic proximity or evolutionary history, are expected to share many traits, resulting in similar assemblage trait distributions. Convergence of assemblage trait distributions among different biotic regions would indicate that consistent ecological processes produce repeated patterns of adaptive evolution. This study analyzes trait–environment relationships across multiple stream fish assemblages representing evolutionarily divergent faunas. We hypothesized that trait–environment patterns converge across regional faunas in response to a common set of environmental filters acting on functional traits. One hundred and ninety‐seven species and forty streams were sampled from five regions: Belize, Benin, Brazil, Cambodia and USA. By examining trait–environment plots, multiple congruent trait–environment patterns were found across all regions, indicative of a consistent set of environmental filters acting on local community assembly. The consistency of these patterns strongly suggests that water velocity and habitat structural complexity function as universal environmental filters, producing similar assemblage trait distributions in streams across all regions. Bivariate relationships were not universal, and only one of the associations between a single functional trait and single environmental variable was statistically significant across all five regions. Strong phylogenetic signal was found in traits and habitat use, which implies that niche conservatism also influenced assemblage trait distributions. Overall, results support the idea that habitat templates structure trait distributions of stream fish assemblages and do so in a consistent manner.

Freshwater fishes often show large amounts of body shape variation across divergent habitats and, in most cases, the observed differences have been attributed to the environmental pressures of living in lentic or lotic habitats. Previous studies have suggested a distinct set characters and morphological features for species occupying each habitat under the steady–unsteady swimming performance model. We tested this model and assessed body shape variation using geometric morphometrics for two widespread fishes, Goodea atripinnis (Goodeidae) and Chirostoma jordani (Atherinopsidae), inhabiting lentic and lotic habitats across the Mesa Central of Mexico. These species were previously shown to display little genetic variation across their respective ranges. Our body shape analyses reveal morphometric differentiation along the same axes for both species in each habitat. Both possess a deeper body shape in lentic habitats and a more streamlined body in lotic habitats, although the degree of divergence between habitats was less for C. jordani. Differences in the position of the mouth differed between habitats as well, with both species possessing a more superior mouth in lentic habitats. These recovered patterns are generally consistent with the steady–unsteady swimming model and highlight the significance of environmental forces in driving parallel body shape differences of organisms in divergent habitats. © 2014 The Linnean Society of London, Biological Journal of the Linnean Society, 2014, 114, 152–162.

This study adopts an ecomorphological approach to test the utility of body shape as a predictor of niche relationships among a stream fish assemblage of the Tickfaw River (Lake Pontchartrain Basin) in southeastern Louisiana, U.S.A. To examine the potential influence of evolutionary constraints, analyses were performed with and without the influence of phylogeny. Fish assemblages were sampled throughout the year, and ecological data (habitat and tropic guild) and body shape (geometric morphometric) data were collected for each fish specimen. Multivariate analyses were performed to examine relationships and differences between body shape and ecological data. Results indicate that a relationship exists between body shape and trophic guild as well as flow regime, but no significant correlation between body shape and substratum was found. Body shape was a reliable indicator of position within assemblage niche space.

Understanding of community assembly has been improved by phylogenetic and trait‐based approaches, yet there is little consensus regarding the relative importance of alternative mechanisms and few studies have been done at large geographic and phylogenetic scales. Here, we use phylogenetic and trait dispersion approaches to determine the relative contribution of limiting similarity and environmental filtering to community assembly of stream fishes at an intercontinental scale. We sampled stream fishes from five zoogeographic regions. Analysis of traits associated with habitat use, feeding, or both resulted in more occurrences of trait underdispersion than overdispersion regardless of spatial scale or species pool. Our results suggest that environmental filtering and, to a lesser extent, species interactions were important mechanisms of community assembly for fishes inhabiting small, low‐gradient streams in all five regions. However, a large proportion of the trait dispersion values were no different from random. This suggests that stochastic factors or opposing assembly mechanisms also influenced stream fish assemblages and their trait dispersion patterns. Local assemblages tended to have lower functional diversity in microhabitats with high water velocity, shallow water depth, and homogeneous substrates lacking structural complexity, lending support for the stress‐dominance hypothesis. A high prevalence of functional underdispersion coupled with phylogenetic underdispersion could reflect phylogenetic niche conservatism and/or stabilizing selection. These findings imply that environmental filtering of stream fish assemblages is not only deterministic, but also influences assemblage structure in a fairly consistent manner worldwide.

Food webs are not static entities; consumer resource interactions vary in both time and space, which complicates depiction and comparisons of food web structures. We estimated fish assemblage structure and diets in two clear-water streams in the Venezuelan Llanos region (Charcote and Charcotico) and constructed trophic networks (sub-webs defined by fishes as the principal consumers) during four periods of the annual flood pulse. As stream conditions changed from high-water to low-water, we hypothesized that: 1) the piscivore-non-piscivore ratio would increase; 2) dietary diversity would decrease; 3) interspecific dietary overlap would decline; 4) fewer allochthonous food items would be consumed; and 5) food-web connectance would increase. The piscivore-non-piscivore abundance ratio was higher in both streams during the low-water period. Dietary diversity declined as water levels dropped and availability of aquatic habitats and resources declined, but interspecific dietary overlap was not lower. Contrary to our hypothesis, average interspecific dietary overlap increased at Charcote as the dry season progressed, even though dietary overlap among species was significantly lower than expected by chance. We did not find strong support for our hypotheses regarding seasonal patterns of consumption of allochthonous resources and food web connectance, both of which revealed little seasonal variation.Keywords: Aquatic ecosystem, Flood pulse, Predation, Predator-prey interactions, Trophic niche.Redes alimentares não são entidades estáticas; interações entre consumidores e recursos variam no tempo e no espaço, o que complica as representações das estruturas de redes alimentares. Nós estimamos a estrutura da assembléia de peixes e dieta em dois riachos de água clara na região venezuelana dos Llanos (Charcote e Charcotico) e construímos redes tróficas (sub-redes definidas por peixes como os principais consumidores) para quatro períodos do pulso anual de inundação. À medida que as condições dos riachos mudam de águas altas para águas baixas, nós hipotetizamos que: 1) a razão piscívoros e não piscívoros irá aumentar; 2) a diversidade da dieta irá diminuir; 3) a sobreposição alimentar interespecífica irá diminuir; 4) menos itens alimentares alóctones serão consumidos; e 5) a conectância da teia alimentar irá aumentar. A razão da abundância de piscívoros e não piscívoros foi maior em ambos riachos durante a estação de águas baixas. A diversidade da dieta declinou à medida que as águas baixavam e a disponibilidade de habitats aquáticos e recursos declinavam, mas a sobreposição alimentar interespecífica não foi menor. Contrária à nossa hipótese, a média de sobreposição alimentar interespecífica aumentou no Charcote à medida que a estação cheia progrediu, mesmo com a sobreposição alimentar significativamente menor do que o esperado ao acaso. Não encontramos forte suporte para nossas hipóteses relacionadas aos padrões sazonais de consumo de recursos alóctones e conectância da cadeia trófica, os quais revelaram pouca variação sazonal....

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