There is more to maerl than meets the eye: DNA barcoding reveals a new species in Britain, Lithothamnion erinaceum sp. nov. (Hapalidiales, Rhodophyta) University of Bristol -Explore Bristol Research General rightsThis document is made available in accordance with publisher policies. Please cite only the published version using the reference above. Full terms of use are available: http://www.bristol.ac.uk/pure/about/ebr-terms Lithothamnion lemoineae, which had earlier been recorded from Britain, was not present. One of the biggest concerns at present is how organisms will respond to climate change and ocean acidification, and it is imperative that investigations are put on a firm taxonomic basis. Our study has highlighted the importance of using molecular techniques to aid in the elucidation of cryptic diversity.
The largest organic carbon (OC) reservoir on Earth is in the geosphere, mainly comprising insoluble organic matter (IOM). IOM formation, therefore, plays an important role in the short and long-term carbon cycle, carbon bioavailability and formation of source rocks. To explore the mechanism of insolubilization of organic matter (OM), we have analysed soluble and IOM fractions of continental shelf marine sediments. We have applied sequential solvent-extractions followed by a selective chemical degradation of the post-extraction residue, specifically targeting prokaryotic membrane lipids (branched fatty acids -FAs, hopanoids, archaeol and glycerol dialkyl glycerol tetraethers -GDGTs). Up to 80% of prokaryotic membrane lipids are not solvent-extractable, and we observe compound-specific differences in partitioning between soluble and IOM fractions. Based on these observations, we propose a variety of mechanisms for the incorporation of prokaryotic lipids into IOM in marine sediments: First, OM association with authigenic carbonates; second, cross-linking via esterification reactions with time, which could be particularly relevant for FAs; third, competition between reactivity and loss of polar head groups, the latter rendering the OM less susceptible to incorporation; and finally, inherent solvent-insolubility of some lipids associated with prokaryotic cells.
Abstract. Coralline algae are important habitat formers found on all rocky shores. While the impact of future ocean acidification on the physiological performance of the species has been well studied, little research has focused on potential changes in structural integrity in response to climate change. A previous study using 2-D Finite Element Analysis (FEA) suggested increased vulnerability to fracture (by wave action or boring) in algae grown under high CO 2 conditions. To assess how realistically 2-D simplified models represent structural performance, a series of increasingly biologically accurate 3-D FE models that represent different aspects of coralline algal growth were developed. Simplified geometric 3-D models of the genus Lithothamnion were compared to models created from computed tomography (CT) scan data of the same genus. The biologically accurate model and the simplified geometric model representing individual cells had similar average stresses and stress distributions, emphasising the importance of the cell walls in dissipating the stress throughout the structure. In contrast models without the accurate representation of the cell geometry resulted in larger stress and strain results. Our more complex 3-D model reiterated the potential of climate change to diminish the structural integrity of the organism. This suggests that under future environmental conditions the weakening of the coralline algal skeleton along with increased external pressures (wave and bioerosion) may negatively influence the ability for coralline algae to maintain a habitat able to sustain high levels of biodiversity.
A molecular and morphological taxonomic study of Corallina (Corallinales, Rhodophyta) from Tristan da Cunha and the Falkland Islands revealed Corallina chamberlainiae J.Brodie & R.Mrowicki sp. nov. from both South Atlantic archipelagos, and Corallina cf. caespitosa only in the Falkland Islands. Analysis of mitochondrial COI-5P and plastid psbA resolved C. chamberlainiae as a distinct clade composed of specimens from Tristan and the Falkland Islands (COI-5P), in addition to two matching New Zealand samples (psbA). In psbA analyses, C. cf. caespitosa was close to two species from Japan (as C. pilulifera and C. melobesioides) but was separate from C. caespitosa sensu stricto from Britain and C. ferreyrae (isotype) from Peru. In COI-5P analyses, C. cf. caespitosa was in a clade with C. caespitosa (holotype) and close to, but distinct from, C. ferreyrae and an unidentified South African Corallina species. Application of the Automatic Barcode Gap Discovery (ABGD) and Poisson tree processes (bPTP) for COI-5P lumped C. chamberlainiae into one clade, whereas the Generalized Mixed Yule Coalescent (GMYC) model split it into two well-supported groups, one of which only contained Falkland Island specimens. All three models lumped C. cf. caespitosa with C. caespitosa. C. chamberlainiae closely resembles C. officinalis, the generitype, but is distinguished by smaller size and a more compressed thallus towards the apex. Corallina cf. caespitosa resembles C. caespitosa but is smaller and has fused, palm-like upper fronds. Neither of these taxa is conspecific with C. ferreyrae although C. caespitosa was recently synonymized with C. ferreyrae. C. chamberlainiae and C. cf. caespitosa occupy similar intertidal habitats to their respective, closely related counterparts C. officinalis and C. caespitosa. The results indicate cryptic diversity and suggest that there are many misidentified Corallina species. The paucity of South Atlantic studies of the Corallinales points to the need for a much greater taxonomic effort in this biogeographic region.
Abstract. Coralline algae are important habitat formers found on all rocky shores. While the impact of future ocean acidification on the physiological performance of the species has been well studied, little research has focussed on potential changes in structural integrity in response to climate change. A previous study using 2-D Finite Element Analysis (FEA), suggested increased vulnerability to fracture (by wave action or boring) in algae grown under high CO2 conditions. To assess how realistically 2-D simplified models represent structural performance, a series of increasingly biologically accurate 3-D FE-models that represent coralline algal growth were developed. Simplified geometric 3-D models of the genus Lithothamnion were compared to models created from computed tomography (CT) scan data of the same genus. The biologically accurate model and the simplified geometric model representing individual cells had similar average stresses and stress distributions, emphasizing the importance of the cell walls in dissipating the stress throughout the structure. In contrast models without the accurate representation of the cell geometry resulted in larger stress and strain results. Our more complex 3-D model reiterated the potential of climate change to diminish the structural integrity of the organism. This suggests that under future environmental conditions the weakening of the coralline algal skeleton along with increased external pressures (wave and bioerosion) may negatively influence the ability for coralline algae to maintain a habitat able to sustain high levels of biodiversity.
Most organic matter (OM) on Earth occurs as kerogen‐like materials, that is naturally formed macromolecules insoluble with standard organic solvents. The formation of this insoluble organic matter (IOM) is a topic of much interest, especially when it limits the detection of compounds of geomicrobiological interest. For example, studies that search for biomarker evidence of life on early Earth or other planets usually use solvent‐based extractions. This leaves behind a pool of OM as unexplored post‐extraction residues, potentially containing diagnostic biomarkers. Since the IOM has an enhanced potential for preservation compared to soluble OM, analysing IOM‐released biomarkers can also provide even deeper insights into the ecology of ancient settings, with implications for early Earth and Astrobiology investigations. Here, we analyse the prokaryotic lipid biosignature within soluble and IOM of the Taupo Volcanic Zone (TVZ) silica sinters, which are key analogues in the search for life. We apply sequential solvent extractions and a selective chemical degradation upon the post‐solvent extraction residue. Moreover, we compare the IOM from TVZ sinters to analogous studies on peat and marine sediments to assess patterns in OM insolubilisation across the geosphere. Consistent with previous work, we find significant but variable proportions—1%–45% of the total prokaryotic lipids recovered—associated with IOM fractions. This occurs even in recently formed silica sinters, likely indicating inherent cell insolubility. Moreover, archaeal lipids seem more prone to insolubilisation as compared to the bacterial analogues, which might enhance their preservation and also bias overall biomarkers interpretation. These observations are similar to those observed in other settings, confirming that even in a setting where the OM derives predominantly from prokaryotic sources, patterns of IOM formation/occurrence are conserved. Differences with other settings, however, such as the occurrence of archaeol in IOM fractions, could be indicative of different mechanisms for IOM formation that merit further exploration.
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