Plant pathogenic Xanthomonas species attack a wide range of agriculture crops and is capable of surviving on weeds. In this study, Xanthomonas strains obtained from weeds grown withing vegetable crop fields in the state of Pernambuco, Northeast Brazil, were identified. Bacterial colonies resembling Xanthomonas were obtained from Aeollanthus suaveolens (strain CCRMXe03), Amaranthus lividus (CCRMXe01 and CCRMXe02), Sida glomerata (CCRMXe04), and Emilia fosbergii (CCRMXe04). All weeds but E. fosbergii exhibited lesions on the leaves. Phylogenetic analysis of the gyrB and rpoD genes and PCR-specific assays allowed to identify X. euvesicatoria pv. euvesicatoria (CCRMXe01, CCRMXe02, CCRMXe03, and CCRMXe04) and X. campestris pv. campestris (CCRMXcc371). All strains but CCRMXe03 were pathogenic to its host of origin. All X. euvesicatoria pv. euvesicatoria strains were pathogenic to leaves and fruits of tomato and bell pepper. Two strains, CCRMXe03 and CCRMXe04, were capable of inducing soft rot in fruits. Amylolytic activity was found in all strains and two strains (CCRMXe03 and CCRMXe04) degraded pectate. Strain CCRMXcc371 was pathogenic to cabbage, kale, cauliflower, and broccoli. This work provides new knowledge of hosts for two important plant pathogenic bacteria for vegetable crops.
Banana vascular wilt or Moko is a disease caused by Ralstonia solanacearum . This study aimed to sequence, assemble, annotate, and compare the genomes of R. solanacearum Moko ecotypes of different sequevar strains from Brazil. Average nucleotide identity analyses demonstrated a high correlation (> 96%) between the genome sequences of strains CCRMRs277 (sequevar IIA-24), CCRMRs287 (IIB-4), CCRMRs304 (IIA-24), and CCRMRsB7 (IIB-25), which were grouped into phylotypes IIA and IIB. The number of coding sequences present in chromosomes and megaplasmids varied from 3,070 to 3,521 and 1,669 to 1,750, respectively. Pangenome analysis identified 3,378 clusters in the chromosomes, of which 2,604 were shared by all four analyzed genomes and 2,580 were single copies. In megaplasmids, 1,834 clusters were identified, of which 1,005 were shared by all four genomes and 992 were identified as single copies. Strains CCRMRsB7 and CCRMRs287 differed from the others by having unique clusters in both their chromosomes and megaplasmids, and CCRMRsB7 possessed the largest genome among all Moko ecotype strains sequenced to date. Therefore, the genomic information obtained in this study provides a theoretical basis for the identification, characterization, and phylogenetic analysis of R. solanacearum Moko ecotypes.
The study aimed to evaluate the efficiency of essential oil concentrations on Cinnamomum zeylanicum leaves as a possible fungicide against mycelial growth, and the sporulation of Corynespora cassiicola in papaya seedling and fruit. The study performed three experiments, namely comparison of the anti-C. cassiicola activity of: 1 µL mL-1 C. zeylanicum essential oil, commercial fungicide, and controltreatment; comparison of the anti-C. cassiicola activity of five essential oil concentrations (0.0, 0.5, 1.0, 2.0, and 4.0 µL mL-1) and a commercial fungicide (150 g ha-1 i.a.); and the effect of applying essential oil concentrations (0.0, 0.5, 1.0, 2.0 and 4.0 µL mL-1) before and after the application of mycelium disk fungus. It was found that the essential oil from C. zeylanicum inhibits mycelial growth and sporulation of the C. cassiicola fungus. The essential oil was able to maintain lower percentage of leaves with lesions in papaya seedling up to 14 days after the inoculation. The essential oil derived from C. zeylanicum, applied as a preventive treatment, is efficient in controlling the size of lesions in papaya fruits, however, the effect is not observed if the essential oil is applied after infection.
Banana tree bacterial wilt is caused by the Ralstonia solanacearum Moko ecotype. These strains vary in their symptom progression in banana, and are classified as typical Moko variants (phylotype IIA and IIB strains from across Central and South America), Bugtok variant (Philippines), and Sergipe facies (the states of Sergipe and Alagoas, Brazil). This study used comparative genomic and phylogenomic approaches to identify a correlation between the symptom progression of the Moko ecotypes based on the analysis of 23 available genomes. Average nucleotide identity and in silico DNA-DNA hybridization revealed a high correlation (>96% and >78%, respectively) between the genomes of Moko variants. Pan-genome analysis identified 21.3% of inheritable regions between representatives of the typical Moko and Sergipe facies variants, which could be traced to an abundance of exclusive homolog clusters. Moko ecotype genomes shared 1,951 orthologous genes, but representatives with typical symptoms did not display unique orthologues. Moreover, Bugtok disease and Sergipe facies genomes did not share any unique genes, suggesting convergent evolution to a shared symptom progression. Overall, genomic and phylogenomic analyses were insufficient to differentiate the Moko variants based on symptom progression.
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